ENSDARG00000104710


Danio rerio

Features
Gene ID: ENSDARG00000104710
  
Biological name :psip1a
  
Synonyms : PC4 and SFRS1 interacting protein 1a / psip1a
  
Possible biological names infered from orthology : Mus musculus PC4 and SFRS1 interacting protein 1 (Psip1), transcript variant 3, mRNA. / O75475 / PC4 and SFRS1 interacting protein 1 / PSIP1 / Q99JF8
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 28089703
Gene end: 28195267
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000140292
NCBI entrez gene - 553760     See in Manteia.
RefSeq - XM_005159893
RefSeq - XM_005159894
RefSeq - NM_001020726
RefSeq Peptide - NP_001018562
swissprot - A0A0R4IXV5
ZFIN ID - ZDB-GENE-050522-104
Ensembl - ENSDARG00000104710
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PSIP1ENSGALG00000015105Gallus gallus
 PSIP1ENSG00000164985Homo sapiens
 Psip1ENSMUSG00000028484Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
hdgfl2 / HDGF like 2 / Q7Z4V5*ENSDARG0000001953037
psip1b / PC4 and SFRS1 interacting protein 1b / PSIP1* / O75475* / Q99JF8* / PC4 and SFRS1 interacting protein 1* / Mus musculus PC4 and SFRS1 interacting protein 1 (Psip1), transcript vari...ENSDARG0000007740530


Protein motifs (from Interpro)
Interpro ID Name
 IPR000313  PWWP domain
 IPR021567  Lens epithelium-derived growth factor, integrase-binding domain
 IPR035496  HDGF-related, PWWP domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr