ENSMUSG00000007029


Mus musculus

Features
Gene ID: ENSMUSG00000007029
  
Biological name :Vars
  
Synonyms : Q9Z1Q9 / valyl-tRNA synthetase / Vars
  
Possible biological names infered from orthology : P26640
  
Species: Mus musculus
  
Chr. number: 17
Strand: 1
Band: B1
Gene start: 35000987
Gene end: 35016322
  
Corresponding Affymetrix probe sets: 10444605 (MoGene1.0st)   1448472_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000134245
Ensembl peptide - ENSMUSP00000084572
Ensembl peptide - ENSMUSP00000133994
Ensembl peptide - ENSMUSP00000134313
Ensembl peptide - ENSMUSP00000134669
NCBI entrez gene - 22321     See in Manteia.
MGI - MGI:90675
RefSeq - XM_017317396
RefSeq - NM_011690
RefSeq - XM_017317395
RefSeq Peptide - NP_035820
swissprot - G3UY93
swissprot - G3UYW2
swissprot - Q9Z1Q9
swissprot - G3UZ22
swissprot - G3UZX1
swissprot - Q790I0
Ensembl - ENSMUSG00000007029
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 varsENSDARG00000044575Danio rerio
 VARSENSG00000204394Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Vars2 / Q3U2A8 / valyl-tRNA synthetase 2, mitochondrial / Q5ST30*ENSMUSG0000003883840


Protein motifs (from Interpro)
Interpro ID Name
 IPR001412  Aminoacyl-tRNA synthetase, class I, conserved site
 IPR002300  Aminoacyl-tRNA synthetase, class Ia
 IPR002303  Valine-tRNA ligase
 IPR004046  Glutathione S-transferase, C-terminal
 IPR009008  Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain
 IPR009080  Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
 IPR010987  Glutathione S-transferase, C-terminal-like
 IPR013155  Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding
 IPR014729  Rossmann-like alpha/beta/alpha sandwich fold
 IPR033705  Valyl tRNA synthetase, anticodon-binding domain
 IPR036282  Glutathione S-transferase, C-terminal domain superfamily
 IPR037118  Valyl-tRNA synthetase, tRNA-binding arm superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 biological_processGO:0006418 tRNA aminoacylation for protein translation IEA
 biological_processGO:0006438 valyl-tRNA aminoacylation IEA
 biological_processGO:0106074 aminoacyl-tRNA metabolism involved in translational fidelity IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IDA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0002161 aminoacyl-tRNA editing activity IEA
 molecular_functionGO:0004812 aminoacyl-tRNA ligase activity IEA
 molecular_functionGO:0004832 valine-tRNA ligase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016874 ligase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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