ENSMUSG00000038838


Mus musculus

Features
Gene ID: ENSMUSG00000038838
  
Biological name :Vars2
  
Synonyms : Q3U2A8 / valyl-tRNA synthetase 2, mitochondrial / Vars2
  
Possible biological names infered from orthology : Q5ST30
  
Species: Mus musculus
  
Chr. number: 17
Strand: -1
Band: B1
Gene start: 35655634
Gene end: 35667592
  
Corresponding Affymetrix probe sets: 10450533 (MoGene1.0st)   1434349_at (Mouse Genome 430 2.0 Array)   1454936_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000126084
Ensembl peptide - ENSMUSP00000129196
Ensembl peptide - ENSMUSP00000132897
Ensembl peptide - ENSMUSP00000047917
Ensembl peptide - ENSMUSP00000126794
NCBI entrez gene - 68915     See in Manteia.
MGI - MGI:1916165
RefSeq - XM_011246589
RefSeq - NM_175137
RefSeq Peptide - NP_780346
swissprot - F7A8L1
swissprot - F6YJY2
swissprot - E9PWQ5
swissprot - Q3U2A8
swissprot - F6Z939
Ensembl - ENSMUSG00000038838
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 vars2ENSDARG00000056717Danio rerio
 VARS2ENSG00000137411Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Vars / Q9Z1Q9 / valyl-tRNA synthetase / P26640*ENSMUSG0000000702948


Protein motifs (from Interpro)
Interpro ID Name
 IPR001412  Aminoacyl-tRNA synthetase, class I, conserved site
 IPR002300  Aminoacyl-tRNA synthetase, class Ia
 IPR002303  Valine-tRNA ligase
 IPR009008  Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain
 IPR009080  Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
 IPR013155  Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding
 IPR014729  Rossmann-like alpha/beta/alpha sandwich fold
 IPR033705  Valyl tRNA synthetase, anticodon-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 biological_processGO:0006418 tRNA aminoacylation for protein translation IEA
 biological_processGO:0006438 valyl-tRNA aminoacylation IEA
 biological_processGO:0106074 aminoacyl-tRNA metabolism involved in translational fidelity IEA
 cellular_componentGO:0005739 mitochondrion IDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0002161 aminoacyl-tRNA editing activity IEA
 molecular_functionGO:0004812 aminoacyl-tRNA ligase activity IEA
 molecular_functionGO:0004832 valine-tRNA ligase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016874 ligase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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