ENSMUSG00000020432


Mus musculus

Features
Gene ID: ENSMUSG00000020432
  
Biological name :Tcn2
  
Synonyms : O88968 / Tcn2 / Transcobalamin-2
  
Possible biological names infered from orthology : P20062
  
Species: Mus musculus
  
Chr. number: 11
Strand: -1
Band: A1
Gene start: 3917192
Gene end: 3932159
  
Corresponding Affymetrix probe sets: 10383799 (MoGene1.0st)   1441850_x_at (Mouse Genome 430 2.0 Array)   1447800_x_at (Mouse Genome 430 2.0 Array)   1447842_x_at (Mouse Genome 430 2.0 Array)   1448200_at (Mouse Genome 430 2.0 Array)   1457825_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000020710
Ensembl peptide - ENSMUSP00000105615
Ensembl peptide - ENSMUSP00000105616
Ensembl peptide - ENSMUSP00000105619
Ensembl peptide - ENSMUSP00000105620
Ensembl peptide - ENSMUSP00000105617
Ensembl peptide - ENSMUSP00000105618
NCBI entrez gene - 21452     See in Manteia.
MGI - MGI:98534
RefSeq - XM_006514613
RefSeq - NM_001130458
RefSeq - NM_001130459
RefSeq - NM_015749
RefSeq - XM_006514610
RefSeq - XM_006514611
RefSeq - XM_006514612
RefSeq Peptide - NP_001123930
RefSeq Peptide - NP_001123931
RefSeq Peptide - NP_056564
swissprot - O88968
Ensembl - ENSMUSG00000020432
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tcn2ENSDARG00000036481Danio rerio
 TCN2ENSG00000185339Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Gif / P52787 / Gastric intrinsic factor / P27352*ENSMUSG0000002468225


Protein motifs (from Interpro)
Interpro ID Name
 IPR002157  Cobalamin (vitamin B12)-binding protein
 IPR027954  Domain of unknown function DUF4430


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006824 cobalt ion transport IEA
 biological_processGO:0015889 cobalamin transport ISO
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space ISS
 molecular_functionGO:0031419 cobalamin binding ISO
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Cobalamin (Cbl, vitamin B12) transport and metabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000002308 Cd320 / Q9Z1P5 / CD320 antigen / Q9NPF0* / CD320 molecule*  / reaction / complex






 

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contact: otassy@igbmc.fr