ENSMUSG00000020570


Mus musculus

Features
Gene ID: ENSMUSG00000020570
  
Biological name :Sypl
  
Synonyms : O09117 / synaptophysin-like protein / Sypl
  
Possible biological names infered from orthology : Q16563 / synaptophysin like 1 / SYPL1
  
Species: Mus musculus
  
Chr. number: 12
Strand: 1
Band: A3
Gene start: 32953891
Gene end: 32979860
  
Corresponding Affymetrix probe sets: 10395277 (MoGene1.0st)   1422879_at (Mouse Genome 430 2.0 Array)   1422880_at (Mouse Genome 430 2.0 Array)   1422881_s_at (Mouse Genome 430 2.0 Array)   1422882_at (Mouse Genome 430 2.0 Array)   1435081_at (Mouse Genome 430 2.0 Array)   1435082_at (Mouse Genome 430 2.0 Array)   1445158_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000020885
Ensembl peptide - ENSMUSP00000075990
Ensembl peptide - ENSMUSP00000122695
NCBI entrez gene - 19027     See in Manteia.
MGI - MGI:108081
RefSeq - NM_013635
RefSeq - NM_198710
RefSeq Peptide - NP_038663
RefSeq Peptide - NP_942003
swissprot - Q3TVX7
swissprot - O09117
swissprot - D6RFU9
Ensembl - ENSMUSG00000020570
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sypl1ENSDARG00000077356Danio rerio
 SYPL1ENSGALG00000029006Gallus gallus
 SYPL1ENSG00000008282Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Synpr / Q8BGN8 / Synaptoporin / Q8TBG9*ENSMUSG0000005629643
Syp / Q62277 / Synaptophysin / P08247*ENSMUSG0000003114440
Sypl2 / O89104 / Synaptophysin-like protein 2 / Q5VXT5* / synaptophysin like 2*ENSMUSG0000002788736


Protein motifs (from Interpro)
Interpro ID Name
 IPR001285  Synaptophysin/synaptoporin
 IPR008253  Marvel domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0008021 synaptic vesicle IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030141 secretory granule IDA
 cellular_componentGO:0030285 integral component of synaptic vesicle membrane IBA
 cellular_componentGO:0030659 cytoplasmic vesicle membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0042470 melanosome IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001402 hypoactivity "reduced movement from one place to another" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, csmith:Cynthia L. Smith , Mouse Genome Informatics Curator, J:64289]
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Allelic Composition: Spns2tm1b(KOMP)Wtsi/Spns2tm1b(KOMP)Wtsi
Genetic Background: B6Brd;B6Dnk;B6N-Tyrc-Brd-Spns2tm1b(KOMP)Wtsi/WtsiH

 MP:0001925 male infertility "inability of male to produce live offspring" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:60409]
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Allelic Composition: Spns2tm1b(KOMP)Wtsi/Spns2tm1b(KOMP)Wtsi
Genetic Background: B6Brd;B6Dnk;B6N-Tyrc-Brd-Spns2tm1b(KOMP)Wtsi/WtsiH

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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