ENSMUSG00000020712


Mus musculus

Features
Gene ID: ENSMUSG00000020712
  
Biological name :Tcam1
  
Synonyms : Tcam1 / testicular cell adhesion molecule 1
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 11
Strand: 1
Band: E1
Gene start: 106276672
Gene end: 106288745
  
Corresponding Affymetrix probe sets: 10382083 (MoGene1.0st)   1421540_at (Mouse Genome 430 2.0 Array)   1435410_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000044757
Ensembl peptide - ENSMUSP00000115544
NCBI entrez gene - 75870     See in Manteia.
MGI - MGI:1923120
RefSeq - XM_006534401
RefSeq - NM_029467
RefSeq - XM_006534398
RefSeq - XM_006534399
RefSeq - XM_006534400
RefSeq Peptide - NP_083743
swissprot - Q99NB3
swissprot - Q9D4R6
Ensembl - ENSMUSG00000020712
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Icam5 / Q60625 / Intercellular adhesion molecule 5 / Q9UMF0*ENSMUSG0000003217435
Icam1 / P13597 / intercellular adhesion molecule 1 / P05362*ENSMUSG0000003740531
Icam2 / P35330 / Intercellular adhesion molecule 2 / P13598*ENSMUSG0000000102918
Icam4 / Q9ERM2 / Intercellular adhesion molecule 4 / Q14773* / intercellular adhesion molecule 4 (Landsteiner-Wiener blood group)*ENSMUSG0000000101412


Protein motifs (from Interpro)
Interpro ID Name
 IPR003987  Intercellular adhesion molecule/vascular cell adhesion molecule, N-terminal
 IPR007110  Immunoglobulin-like domain
 IPR013768  Intercellular adhesion molecule, N-terminal
 IPR013783  Immunoglobulin-like fold
 IPR036179  Immunoglobulin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IBA
 biological_processGO:0098609 cell-cell adhesion ISO
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005178 integrin binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0003698 abnormal male reproductive system physiology "anomaly in the function of the male organs associated with producing offspring " [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: ApcMin/Apc+,Ccdc80tm1.1Ftk/Ccdc80tm1.1Ftk
Genetic Background: involves: 129P2/OlaHsd * BALB/cJ * C57BL/6 * C57BL/6J * C57BL/6N

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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