ENSMUSG00000020817


Mus musculus

Features
Gene ID: ENSMUSG00000020817
  
Biological name :Rabep1
  
Synonyms : O35551 / rabaptin, RAB GTPase binding effector protein 1 / Rabep1
  
Possible biological names infered from orthology : Q15276
  
Species: Mus musculus
  
Chr. number: 11
Strand: 1
Band: B4
Gene start: 70844778
Gene end: 70943105
  
Corresponding Affymetrix probe sets: 10377987 (MoGene1.0st)   1421305_x_at (Mouse Genome 430 2.0 Array)   1426023_a_at (Mouse Genome 430 2.0 Array)   1427448_at (Mouse Genome 430 2.0 Array)   1443856_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000137267
Ensembl peptide - ENSMUSP00000075619
Ensembl peptide - ENSMUSP00000080102
Ensembl peptide - ENSMUSP00000098488
Ensembl peptide - ENSMUSP00000104173
Ensembl peptide - ENSMUSP00000136069
Ensembl peptide - ENSMUSP00000136369
NCBI entrez gene - 54189     See in Manteia.
MGI - MGI:1860236
RefSeq - XM_006533750
RefSeq - NM_001291141
RefSeq - NM_001291142
RefSeq - NM_001291143
RefSeq - NM_019400
RefSeq Peptide - NP_001278070
RefSeq Peptide - NP_001278071
RefSeq Peptide - NP_001278072
RefSeq Peptide - NP_062273
swissprot - O35551
swissprot - Q3U983
swissprot - J3QJV7
Ensembl - ENSMUSG00000020817
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rabep1ENSDARG00000059600Danio rerio
 RABEP1ENSGALG00000001737Gallus gallus
 Q15276ENSG00000029725Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q91WG2 / Rabep2 / Rab GTPase-binding effector protein 2 / Q9H5N1* / rabaptin, RAB GTPase binding effector protein 2*ENSMUSG0000003072724


Protein motifs (from Interpro)
Interpro ID Name
 IPR003914  Rabaptin
 IPR015390  Rabaptin, GTPase-Rab5 binding domain
 IPR018514  Rabaptin coiled-coil domain
 IPR029880  Rabaptin-5


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006897 endocytosis IEA
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0010469 regulation of signaling receptor activity IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport ISO
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005768 endosome ISO
 cellular_componentGO:0005769 early endosome IEA
 cellular_componentGO:0030139 endocytic vesicle ISS
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0032991 protein-containing complex IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle ISO
 cellular_componentGO:0055037 recycling endosome IEA
 molecular_functionGO:0005096 GTPase activator activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008083 growth factor activity IEA
 molecular_functionGO:0019904 protein domain specific binding ISO
 molecular_functionGO:0042803 protein homodimerization activity ISO


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr