ENSMUSG00000022212


Mus musculus

Features
Gene ID: ENSMUSG00000022212
  
Biological name :Cpne6
  
Synonyms : Copine-6 / Cpne6 / Q9Z140
  
Possible biological names infered from orthology : O95741
  
Species: Mus musculus
  
Chr. number: 14
Strand: 1
Band: C3
Gene start: 55510445
Gene end: 55517431
  
Corresponding Affymetrix probe sets: 10415228 (MoGene1.0st)   1449921_s_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000126493
Ensembl peptide - ENSMUSP00000130799
Ensembl peptide - ENSMUSP00000132999
Ensembl peptide - ENSMUSP00000073847
Ensembl peptide - ENSMUSP00000128555
NCBI entrez gene - 12891     See in Manteia.
MGI - MGI:1334445
RefSeq - XM_006518506
RefSeq - NM_001136057
RefSeq - NM_001146183
RefSeq - NM_009947
RefSeq Peptide - NP_001129529
RefSeq Peptide - NP_001139655
RefSeq Peptide - NP_034077
swissprot - Q3UYN2
swissprot - Q9Z140
swissprot - E9QA77
Ensembl - ENSMUSG00000022212
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CPNE6ENSG00000100884Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Cpne7 / Q0VE82 / Copine-7 / Q9UBL6*ENSMUSG0000003479663
Cpne4 / Q8BLR2 / Copine-4 / Q96A23*ENSMUSG0000003256461
Cpne3 / Q8BT60 / Copine-3 / O75131*ENSMUSG0000002822851
Cpne2 / P59108 / Copine-2 / Q96FN4*ENSMUSG0000003436149
Cpne1 / Q8C166 / Copine-1 / Q99829*ENSMUSG0000007464348
Cpne8 / Q9DC53 / Mus musculus copine VIII (Cpne8), transcript variant 3, mRNA. / Q86YQ8* / copine 8*ENSMUSG0000005256047
Cpne5 / Q8JZW4 / Copine-5 / Q9HCH3*ENSMUSG0000002400847
Cpne9 / copine family member 9 / Q8IYJ1*ENSMUSG0000003027045


Protein motifs (from Interpro)
Interpro ID Name
 IPR000008  C2 domain
 IPR002035  von Willebrand factor, type A
 IPR010734  Copine
 IPR035892  C2 domain superfamily
 IPR036465  von Willebrand factor A-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0071277 cellular response to calcium ion IMP
 biological_processGO:1903861 positive regulation of dendrite extension ISO
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IDA
 cellular_componentGO:0030136 clathrin-coated vesicle IEA
 cellular_componentGO:0030424 axon IDA
 cellular_componentGO:0030425 dendrite IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0043204 perikaryon IEA
 cellular_componentGO:0045334 clathrin-coated endocytic vesicle IDA
 molecular_functionGO:0001786 phosphatidylserine binding IDA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Glycerophospholipid biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr