ENSMUSG00000022635


Mus musculus

Features
Gene ID: ENSMUSG00000022635
  
Biological name :Zcrb1
  
Synonyms : Q9CZ96 / Zcrb1 / zinc finger CCHC-type and RNA binding motif 1
  
Possible biological names infered from orthology : Q8TBF4 / zinc finger CCHC-type and RNA binding motif containing 1
  
Species: Mus musculus
  
Chr. number: 15
Strand: -1
Band: E3
Gene start: 93386097
Gene end: 93398334
  
Corresponding Affymetrix probe sets: 10431732 (MoGene1.0st)   1428489_at (Mouse Genome 430 2.0 Array)   1446789_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000075441
Ensembl peptide - ENSMUSP00000124549
Ensembl peptide - ENSMUSP00000125442
NCBI entrez gene - 67197     See in Manteia.
MGI - MGI:1914447
RefSeq - XM_011245713
RefSeq - NM_001347097
RefSeq - NM_026025
RefSeq - XM_006521295
RefSeq Peptide - NP_080301
RefSeq Peptide - NP_001334026
swissprot - Q9CZ96
swissprot - E0CZE5
Ensembl - ENSMUSG00000022635
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zcrb1ENSDARG00000045691Danio rerio
 ZCRB1ENSGALG00000009544Gallus gallus
 ZCRB1ENSG00000139168Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR001878  Zinc finger, CCHC-type
 IPR003954  RNA recognition motif domain, eukaryote
 IPR034219  ZCRB1, RNA recognition motif
 IPR035979  RNA-binding domain superfamily
 IPR036875  Zinc finger, CCHC-type superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome IBA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005681 spliceosomal complex IEA
 cellular_componentGO:0005689 U12-type spliceosomal complex IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Minor Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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