ENSMUSG00000027220


Mus musculus

Features
Gene ID: ENSMUSG00000027220
  
Biological name :Syt13
  
Synonyms : Q9EQT6 / Synaptotagmin-13 / Syt13
  
Possible biological names infered from orthology : Q7L8C5
  
Species: Mus musculus
  
Chr. number: 2
Strand: 1
Band: E1
Gene start: 92915098
Gene end: 92956058
  
Corresponding Affymetrix probe sets: 10474048 (MoGene1.0st)   1434470_at (Mouse Genome 430 2.0 Array)   1451045_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000028648
NCBI entrez gene - 80976     See in Manteia.
MGI - MGI:1933945
RefSeq - NM_030725
RefSeq Peptide - NP_109650
swissprot - Q9EQT6
Ensembl - ENSMUSG00000027220
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 syt13ENSDARG00000012306Danio rerio
 SYT13ENSGALG00000008055Gallus gallus
 SYT13ENSG00000019505Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Syt17 / Q920M7 / Synaptotagmin-17 / Q9BSW7*ENSMUSG0000005842026
Syt12 / Q920N7 / synaptotagmin XII / Q8IV01* / synaptotagmin 12*ENSMUSG0000004930324
Syt15 / Q8C6N3 / Synaptotagmin-15 / Q9BQS2* / FO681492.1*ENSMUSG0000004147919
Syt14 / Q7TN84 / Synaptotagmin-14 / Q8NB59*ENSMUSG0000001620017
Syt16 / Q7TN83 / Synaptotagmin-16 / Q17RD7*ENSMUSG0000004491216


Protein motifs (from Interpro)
Interpro ID Name
 IPR000008  C2 domain
 IPR028692  Synaptotagmin-13
 IPR035892  C2 domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006906 vesicle fusion IBA
 biological_processGO:0016192 vesicle-mediated transport IPI
 biological_processGO:0017158 regulation of calcium ion-dependent exocytosis IBA
 biological_processGO:0048791 calcium ion-regulated exocytosis of neurotransmitter IBA
 cellular_componentGO:0005887 integral component of plasma membrane IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030133 transport vesicle IEA
 cellular_componentGO:0030659 cytoplasmic vesicle membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0098793 presynapse IEA
 molecular_functionGO:0005509 calcium ion binding IBA
 molecular_functionGO:0005544 calcium-dependent phospholipid binding IBA
 molecular_functionGO:0019905 syntaxin binding IBA
 molecular_functionGO:0030276 clathrin binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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