ENSG00000019505


Homo sapiens

Features
Gene ID: ENSG00000019505
  
Biological name :SYT13
  
Synonyms : Q7L8C5 / synaptotagmin 13 / SYT13
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: -1
Band: p11.2
Gene start: 45240301
Gene end: 45286319
  
Corresponding Affymetrix probe sets: 221859_at (Human Genome U133 Plus 2.0 Array)   226086_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000020926
Ensembl peptide - ENSP00000432975
Ensembl peptide - ENSP00000434967
NCBI entrez gene - 57586     See in Manteia.
OMIM - 607716
RefSeq - NM_020826
RefSeq - NM_001247987
RefSeq Peptide - NP_001234916
RefSeq Peptide - NP_065877
swissprot - Q7L8C5
swissprot - H0YD47
swissprot - H0YE47
Ensembl - ENSG00000019505
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 syt13ENSDARG00000012306Danio rerio
 SYT13ENSGALG00000008055Gallus gallus
 Syt13ENSMUSG00000027220Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SYT17 / Q9BSW7 / synaptotagmin 17ENSG0000010352826
SYT12 / Q8IV01 / synaptotagmin 12ENSG0000017322723
SYT15 / Q9BQS2 / synaptotagmin 15ENSG0000020417619
FO681492.1ENSG0000027775819
SYT16 / Q17RD7 / synaptotagmin 16ENSG0000013997317
SYT14 / Q8NB59 / synaptotagmin 14ENSG0000014346917


Protein motifs (from Interpro)
Interpro ID Name
 IPR000008  C2 domain
 IPR028692  Synaptotagmin-13
 IPR035892  C2 domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006906 vesicle fusion IBA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0017158 regulation of calcium ion-dependent exocytosis IBA
 biological_processGO:0048791 calcium ion-regulated exocytosis of neurotransmitter IBA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0005887 integral component of plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030133 transport vesicle IDA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0098793 presynapse IEA
 molecular_functionGO:0005509 calcium ion binding IBA
 molecular_functionGO:0005544 calcium-dependent phospholipid binding IBA
 molecular_functionGO:0019905 syntaxin binding IBA
 molecular_functionGO:0030276 clathrin binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr