ENSMUSG00000028081


Mus musculus

Features
Gene ID: ENSMUSG00000028081
  
Biological name :Rps3a1
  
Synonyms : P97351 / ribosomal protein S3A1 / Rps3a1
  
Possible biological names infered from orthology : P61247 / ribosomal protein S3A / RPS3A
  
Species: Mus musculus
  
Chr. number: 3
Strand: -1
Band: F1
Gene start: 86137940
Gene end: 86142702
  
Corresponding Affymetrix probe sets: 10421908 (MoGene1.0st)   10499121 (MoGene1.0st)   1422475_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000029722
NCBI entrez gene - 20091     See in Manteia.
MGI - MGI:1202063
RefSeq - NM_016959
RefSeq Peptide - NP_058655
swissprot - P97351
swissprot - Q564F3
Ensembl - ENSMUSG00000028081
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rps3aENSDARG00000035692Danio rerio
 RPS3AENSGALG00000010077Gallus gallus
 RPS3AENSG00000145425Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001593  Ribosomal protein S3Ae
 IPR018281  Ribosomal protein S3Ae, conserved site
 IPR027500  40S ribosomal protein S1/3, eukaryotes


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002181 cytoplasmic translation IBA
 biological_processGO:0006412 translation ISS
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0043066 negative regulation of apoptotic process IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022627 cytosolic small ribosomal subunit IEA
 molecular_functionGO:0003735 structural constituent of ribosome IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0048027 mRNA 5"-UTR binding IEA


Pathways (from Reactome)
Pathway description
Formation of the ternary complex, and subsequently, the 43S complex
Ribosomal scanning and start codon recognition
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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