ENSMUSG00000028327


Mus musculus

Features
Gene ID: ENSMUSG00000028327
  
Biological name :Stra6l
  
Synonyms : Q9DBN1 / Stimulated by retinoic acid 6 protein-like / Stra6l
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 4
Strand: 1
Band: B1
Gene start: 45848664
Gene end: 45887008
  
Corresponding Affymetrix probe sets: 10504582 (MoGene1.0st)   1453234_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000030011
Ensembl peptide - ENSMUSP00000103411
Ensembl peptide - ENSMUSP00000103412
NCBI entrez gene - 74152     See in Manteia.
MGI - MGI:1921402
RefSeq - XM_017320413
RefSeq - NM_001305421
RefSeq - NM_028788
RefSeq - XM_006538314
RefSeq - XM_006538315
RefSeq - XM_006538317
RefSeq - XM_006538310
RefSeq - XM_006538311
RefSeq - XM_006538312
RefSeq - XM_006538313
RefSeq Peptide - NP_083064
RefSeq Peptide - NP_001292350
swissprot - Q9DBN1
Ensembl - ENSMUSG00000028327
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 stra6lENSDARG00000062467Danio rerio


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Stra6 / stimulated by retinoic acid gene 6 / Q9BX79* / stimulated by retinoic acid 6*ENSMUSG0000003232721


Protein motifs (from Interpro)
Interpro ID Name
No match


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0034633 retinol transport IGI
 biological_processGO:0071939 vitamin A import IMP
 cellular_componentGO:0005886 plasma membrane IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001314 corneal opacity "complete or partial clouding of the cornea" [jte:Janan T. Eppig , Mouse Genome Informatics, Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8]
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Allelic Composition: Spata22tm1b(KOMP)Wtsi/Spata22tm1b(KOMP)Wtsi
Genetic Background: C57BL/6N-Spata22tm1b(KOMP)Wtsi/Ucd

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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