ENSMUSG00000028360


Mus musculus

Features
Gene ID: ENSMUSG00000028360
  
Biological name :Slc44a5
  
Synonyms : Q5RJI2 / Slc44a5 / solute carrier family 44, member 5
  
Possible biological names infered from orthology : Q8NCS7
  
Species: Mus musculus
  
Chr. number: 3
Strand: 1
Band: H3
Gene start: 153973436
Gene end: 154271722
  
Corresponding Affymetrix probe sets: 10496975 (MoGene1.0st)   
  
Cross references: Ensembl peptide - ENSMUSP00000087394
NCBI entrez gene - 242259     See in Manteia.
MGI - MGI:3035141
RefSeq - XM_006501501
RefSeq - NM_001081263
RefSeq - XM_006501499
RefSeq - XM_006501500
RefSeq - XM_006501488
RefSeq - XM_006501489
RefSeq - XM_006501490
RefSeq - XM_006501492
RefSeq - XM_006501493
RefSeq - XM_006501494
RefSeq - XM_006501495
RefSeq - XM_006501496
RefSeq - XM_006501497
RefSeq - XM_006501498
RefSeq Peptide - NP_001074732
swissprot - Q5RJI2
Ensembl - ENSMUSG00000028360
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slc44a5aENSDARG00000017398Danio rerio
 slc44a5bENSDARG00000057419Danio rerio
 SLC44A5ENSGALG00000011379Gallus gallus
 Q8NCS7ENSG00000137968Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8BY89 / Slc44a2 / solute carrier family 44, member 2 / Q8IWA5*ENSMUSG0000005719352
Q91VA1 / Slc44a4 / solute carrier family 44, member 4 / Q53GD3*ENSMUSG0000000703443
Q921V7 / Slc44a3 / solute carrier family 44, member 3 / Q8N4M1*ENSMUSG0000003986522
Q6X893 / Slc44a1 / solute carrier family 44, member 1 / Q8WWI5*ENSMUSG0000002841222


Protein motifs (from Interpro)
Interpro ID Name
 IPR007603  Choline transporter-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
Synthesis of PC
Transport of bile salts and organic acids, metal ions and amine compounds


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002590 increased mean corpuscular volume "greater than the average amount of space occupied by each red blood cell, calculated from the hematocrit and red cell count, in erythrocyte indices" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator, Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Slc38a10tm1a(EUCOMM)Wtsi/Slc38a10tm1a(EUCOMM)Wtsi
Genetic Background: B6JTyr;B6N-Slc38a10tm1a(EUCOMM)Wtsi/Wtsi

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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