ENSMUSG00000028483


Mus musculus

Features
Gene ID: ENSMUSG00000028483
  
Biological name :Snapc3
  
Synonyms : Q9D2C9 / small nuclear RNA activating complex, polypeptide 3 / Snapc3
  
Possible biological names infered from orthology : Q92966
  
Species: Mus musculus
  
Chr. number: 4
Strand: 1
Band: C3
Gene start: 83417724
Gene end: 83467676
  
Corresponding Affymetrix probe sets: 10505630 (MoGene1.0st)   1428760_at (Mouse Genome 430 2.0 Array)   1428761_a_at (Mouse Genome 430 2.0 Array)   1453077_a_at (Mouse Genome 430 2.0 Array)   1457731_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000124468
Ensembl peptide - ENSMUSP00000124038
Ensembl peptide - ENSMUSP00000124181
Ensembl peptide - ENSMUSP00000030206
Ensembl peptide - ENSMUSP00000102842
Ensembl peptide - ENSMUSP00000123793
NCBI entrez gene - 77634     See in Manteia.
MGI - MGI:1916338
RefSeq - XM_017320456
RefSeq - NM_001358795
RefSeq - NM_029949
RefSeq - XM_006538369
RefSeq - XM_006538370
RefSeq - XM_006538372
RefSeq - XM_011250134
RefSeq - XM_017320455
RefSeq Peptide - NP_001345724
RefSeq Peptide - NP_084225
swissprot - Q9CQB0
swissprot - Q9D2C9
swissprot - E0CY59
Ensembl - ENSMUSG00000028483
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 snapc3ENSDARG00000101474Danio rerio
 SNAPC3ENSGALG00000011323Gallus gallus
 Q92966ENSG00000164975Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR022042  snRNA-activating protein complex, subunit 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IBA
 biological_processGO:0009301 snRNA transcription IBA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0016604 nuclear body IEA
 molecular_functionGO:0003677 DNA binding IBA


Pathways (from Reactome)
Pathway description
RNA polymerase II transcribes snRNA genes
RNA Polymerase III Transcription Initiation From Type 3 Promoter


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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