ENSMUSG00000028521


Mus musculus

Features
Gene ID: ENSMUSG00000028521
  
Biological name :Slc35d1
  
Synonyms : A2AKQ0 / Slc35d1 / solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1
  
Possible biological names infered from orthology : Q9NTN3 / solute carrier family 35 member D1
  
Species: Mus musculus
  
Chr. number: 4
Strand: -1
Band: C6
Gene start: 103170649
Gene end: 103215164
  
Corresponding Affymetrix probe sets: 10514732 (MoGene1.0st)   1433595_at (Mouse Genome 430 2.0 Array)   1445629_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000138926
Ensembl peptide - ENSMUSP00000037617
Ensembl peptide - ENSMUSP00000122124
NCBI entrez gene - 242585     See in Manteia.
MGI - MGI:2140361
RefSeq - XM_006503080
RefSeq - NM_001356276
RefSeq - NM_177732
RefSeq - XM_006503079
RefSeq Peptide - NP_001343205
RefSeq Peptide - NP_808400
swissprot - A2AKQ0
swissprot - V9GX08
swissprot - A0A217FL58
Ensembl - ENSMUSG00000028521
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slc35d1aENSDARG00000011973Danio rerio
 SLC35D1ENSGALG00000011121Gallus gallus
 Q9NTN3ENSG00000116704Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Slc35d2 / solute carrier family 35, member D2 / Q76EJ3* / AL160269.1*ENSMUSG0000003311447
Q8BGF8 / Slc35d3 / Solute carrier family 35 member D3 / Q5M8T2*ENSMUSG0000005047321


Protein motifs (from Interpro)
Interpro ID Name
 IPR004853  Sugar phosphate transporter domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008643 carbohydrate transport IEA
 biological_processGO:0030206 chondroitin sulfate biosynthetic process IMP
 biological_processGO:0048706 embryonic skeletal system development IMP
 biological_processGO:0090481 pyrimidine nucleotide-sugar transmembrane transport IDA
 cellular_componentGO:0005783 endoplasmic reticulum IDA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IDA


Pathways (from Reactome)
Pathway description
Formation of the active cofactor, UDP-glucuronate
Transport of nucleotide sugars


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000445 short snout "reduced length of the anterior facial part of the muzzle" [J:53370]
Show

Allelic Composition: Fbxw8Gt(RRT057)Byg/Fbxw8Gt(RRT057)Byg
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0000547 short limbs "reduced average length of the extremities" [MGI:CLS, J:61509]
Show

Allelic Composition: Fbxw8Gt(RRT057)Byg/Fbxw8Gt(RRT057)Byg
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0001258 decreased body length "decreased crown to tail distance compared to controls" [cwg:Carroll W. Goldsmith, Mouse Genome Informatics Curator]
Show

Allelic Composition: Fbxw8Gt(RRT057)Byg/Fbxw8Gt(RRT057)Byg
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0001270 distended abdomen "abdomen appears curved outward or swollen; can be due to skeletal axial defects, enlarged visceral organs or megacolon" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Fbxw8Gt(RRT057)Byg/Fbxw8Gt(RRT057)Byg
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0002116 abnormal craniofacial bone morphology "abnormal development of cranial or facial bones resulting in morphological abnormality" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Fbxw8Gt(RRT057)Byg/Fbxw8Gt(RRT057)Byg
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0002657 chondrodystrophy "abnormal development of the cartilage primordia of long bones, resulting in abnormally short extremities but normal head and trunk" [il:Ira Lu , Mouse Genome Informatics Curator]
Show

Allelic Composition: Fbxw8Gt(RRT057)Byg/Fbxw8Gt(RRT057)Byg
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0003662 abnormal proliferative zone "germinal layer of the epiphyseal plate where cells are actively dividing as well as producing extracellular matrix" [smb:Susan M Bello, Mouse Genome Informatics Curator, J:96254]
Show

Allelic Composition: Fbxw8Gt(RRT057)Byg/Fbxw8Gt(RRT057)Byg
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0004134 abnormal chest morphology "malformation of the part of the body between the neck and the abdomen " [smb:Susan M Bello, Mouse Genome Informatics Curator, J:59168]
Show

Allelic Composition: Fbxw8Gt(RRT057)Byg/Fbxw8Gt(RRT057)Byg
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0004686 decreased length of long bones "reduced end-to-end length of the several elongated bones of the extremities" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Fbxw8Gt(RRT057)Byg/Fbxw8Gt(RRT057)Byg
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0005354 abnormal ilium morphology "structural anomaly of the broad, flaring portion of the hip bone, which is distinct at birth, but later fuses with the ischium and the pubis " [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator, Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:47316]
Show

Allelic Composition: Fbxw8Gt(RRT057)Byg/Fbxw8Gt(RRT057)Byg
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0009908 protruding tongue "the tongue extends out beyond the oral cavity past the lips; may be due to paralysis, oral cavity size, tongue hypoplasia or dysfunction of the hypoglossal nerve" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Fbxw8Gt(RRT057)Byg/Fbxw8Gt(RRT057)Byg
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0011087 complete neonatal lethality "death of all organisms of a given genotype in a population within the neonatal period after birth (Mus: P0)" [MGI:csmith]
Show

Allelic Composition: Fbxw8Gt(RRT057)Byg/Fbxw8Gt(RRT057)Byg
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0011175 platyspondylia "flatness of the bodies of the vertebrae; one or many vertebrae may be affected" [ISBN:0-683-40008-8]
Show

Allelic Composition: Fbxw8Gt(RRT057)Byg/Fbxw8Gt(RRT057)Byg
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000028521 A2AKQ0 / Slc35d1 / solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1 / Q9NTN3* / solute carrier family 35 member D1*  / complex






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr