ENSMUSG00000029597


Mus musculus

Features
Gene ID: ENSMUSG00000029597
  
Biological name :Sds
  
Synonyms : Q8VBT2 / Sds / serine dehydratase
  
Possible biological names infered from orthology : P20132
  
Species: Mus musculus
  
Chr. number: 5
Strand: 1
Band: F
Gene start: 120476526
Gene end: 120483932
  
Corresponding Affymetrix probe sets: 10525076 (MoGene1.0st)   1424744_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000143838
Ensembl peptide - ENSMUSP00000064849
Ensembl peptide - ENSMUSP00000107529
NCBI entrez gene - 231691     See in Manteia.
MGI - MGI:98270
RefSeq - NM_145565
RefSeq - XM_006530298
RefSeq Peptide - NP_663540
swissprot - D3Z221
swissprot - Q3UEN6
swissprot - Q8VBT2
Ensembl - ENSMUSG00000029597
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SDSENSG00000135094Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Sdsl / Q8R238 / Serine dehydratase-like / Q96GA7*ENSMUSG0000002959660


Protein motifs (from Interpro)
Interpro ID Name
 IPR000634  Serine/threonine dehydratase, pyridoxal-phosphate-binding site
 IPR001926  Pyridoxal-phosphate dependent enzyme
 IPR036052  Tryptophan synthase beta subunit-like PLP-dependent enzyme


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006094 gluconeogenesis IEA
 biological_processGO:0006520 cellular amino acid metabolic process IEA
 biological_processGO:0006565 L-serine catabolic process ISO
 biological_processGO:0042866 pyruvate biosynthetic process ISO
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion ISO
 cellular_componentGO:0005829 cytosol ISO
 molecular_functionGO:0003941 L-serine ammonia-lyase activity ISO
 molecular_functionGO:0004794 L-threonine ammonia-lyase activity IEA
 molecular_functionGO:0016829 lyase activity IEA
 molecular_functionGO:0030170 pyridoxal phosphate binding IEA
 molecular_functionGO:0042803 protein homodimerization activity ISO


Pathways (from Reactome)
Pathway description
Threonine catabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000029597 Sds / Q8VBT2 / serine dehydratase / P20132*  / complex






 

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