ENSMUSG00000029847


Mus musculus

Features
Gene ID: ENSMUSG00000029847
  
Biological name :Slc23a4
  
Synonyms : Slc23a4
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 6
Strand: -1
Band: B1
Gene start: 34945278
Gene end: 34988404
  
Corresponding Affymetrix probe sets: 10543895 (MoGene1.0st)   1455449_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000041436
Ensembl peptide - ENSMUSP00000144387
Ensembl peptide - ENSMUSP00000122803
Ensembl peptide - ENSMUSP00000119927
NCBI entrez gene - 243753     See in Manteia.
MGI - MGI:1917272
RefSeq - XM_006506134
RefSeq - NM_001025573
RefSeq Peptide - NP_001020744
swissprot - F6S2M6
swissprot - D3Z3R5
swissprot - E9PW54
swissprot - A0A0J9YUX7
Ensembl - ENSMUSG00000029847
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zgc:110789ENSDARG00000052497Danio rerio
 ENSGALG00000011717Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9Z2J0 / Slc23a1 / Solute carrier family 23 member 1 / Q9UHI7*ENSMUSG0000002435447
Q9EPR4 / Slc23a2 / Mus musculus solute carrier family 23 (nucleobase transporters), member 2 (Slc23a2), transcript variant 2, mRNA. / Q9UGH3* / solute carrier family 23 member 2*ENSMUSG0000002734046
Slc23a3 / solute carrier family 23 member 3 / Q6PIS1*ENSMUSG0000002620524


Protein motifs (from Interpro)
Interpro ID Name
 IPR006042  Xanthine/uracil permease
 IPR006043  Xanthine/uracil/vitamin C permease


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005215 transporter activity IEA
 molecular_functionGO:0022857 transmembrane transporter activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000221 decreased WBC count "fewer than normal numbers of WBCs" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator, MeSH:National Library of Medicine - Medical Subject Headings , 2003]
Show

Allelic Composition: Magel2tm1Stw/Magel2tm1Stw
Genetic Background: C57BL/6-Magel2tm1Stw/J

 MP:0001262 decreased body weight "lower than normal average weight " [J:61295]
Show

Allelic Composition: Magel2tm1Stw/Magel2tm1Stw
Genetic Background: C57BL/6-Magel2tm1Stw/J

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr