Manteia

ENSMUSG00000030672

Mus musculus

Features

Gene ID:	ENSMUSG00000030672

Biological name :	Mylpf

Synonyms :	Mus musculus myosin light chain, phosphorylatable, fast skeletal muscle (Mylpf), transcript variant 2, mRNA. / Mylpf / P97457

Possible biological names infered from orthology :	myosin light chain, phosphorylatable, fast skeletal muscle / Q96A32

Species:	Mus musculus

Chr. number:	7
Strand:	1
Band:	F3
Gene start:	127208890
Gene end:	127214298

Corresponding Affymetrix probe sets:	10557575 (MoGene1.0st) 1448371_at (Mouse Genome 430 2.0 Array)

Cross references:	Ensembl peptide - ENSMUSP00000145886 Ensembl peptide - ENSMUSP00000146230 Ensembl peptide - ENSMUSP00000032910 Ensembl peptide - ENSMUSP00000120915 NCBI entrez gene - 17907 See in Manteia. MGI - MGI:97273 RefSeq - NM_016754 RefSeq - XM_006507422 RefSeq - XM_006507421 RefSeq - NM_001347655 RefSeq Peptide - NP_001334584 RefSeq Peptide - NP_058034 swissprot - F6ULR7 swissprot - P97457 swissprot - Q545G1 swissprot - A0A0U1RP93 swissprot - A0A0U1RQ36 Ensembl - ENSMUSG00000030672

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
Myl2 / P51667 / Myosin regulatory light chain 2, ventricular/cardiac muscle isoform / P10916* / myosin light chain 2*	ENSMUSG00000013936	74
Myl10 / Q62082 / Myosin regulatory light chain 10 / Q9BUA6* / myosin light chain 10*	ENSMUSG00000005474	66
Myl7 / Q9QVP4 / Myosin regulatory light chain 2, atrial isoform / Q01449* / myosin light chain 7*	ENSMUSG00000020469	57
Myl12a	ENSMUSG00000024048	57
Myl12b / Q3THE2 / Myosin regulatory light chain 12B / O14950* / myosin light chain 12B*	ENSMUSG00000034868	56
Myl9 / Q9CQ19 / Myosin regulatory light polypeptide 9	ENSMUSG00000067818	55

Protein motifs (from Interpro)

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0006955	immune response	IEA
biological_process	GO:0007519	skeletal muscle tissue development	IEA
cellular_component	GO:0016459	myosin complex	IEA
molecular_function	GO:0005509	calcium ion binding	IEA
molecular_function	GO:0008307	structural constituent of muscle	IMP
molecular_function	GO:0046872	metal ion binding	IEA

Pathways (from Reactome)

Pathway description

Smooth Muscle Contraction

Phenotype (from MGI, Zfin or HPO)

ID	Phenotype	Definition	Genetic BG
MP:0001262	decreased body weight	"lower than normal average weight " [J:61295]	Show Allelic Composition: Otx2^tm3Tlam/Otx2^tm3Tlam Genetic Background: 129/Sv-Otx2^tm3Tlam
MP:0001953	respiratory failure	"cessation of or failure to commence breathing" [MGI:cls, J:60159]	Show Allelic Composition: Otx2^tm3Tlam/Otx2^tm3Tlam Genetic Background: 129/Sv-Otx2^tm3Tlam
MP:0004846	absent skeletal muscle	"absence of any of the striated muscle fibers connected at either or both extremities with the bony framework of the body" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition"]	Show Allelic Composition: Otx2^tm3Tlam/Otx2^tm3Tlam Genetic Background: 129/Sv-Otx2^tm3Tlam
MP:0011087	complete neonatal lethality	"death of all organisms of a given genotype in a population within the neonatal period after birth (Mus: P0)" [MGI:csmith]	Show Allelic Composition: Otx2^tm3Tlam/Otx2^tm3Tlam Genetic Background: 129/Sv-Otx2^tm3Tlam

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr