ENSMUSG00000031517


Mus musculus

Features
Gene ID: ENSMUSG00000031517
  
Biological name :Gpm6a
  
Synonyms : glycoprotein m6a / Gpm6a / P35802
  
Possible biological names infered from orthology : P51674
  
Species: Mus musculus
  
Chr. number: 8
Strand: 1
Band: B1.3
Gene start: 54954843
Gene end: 55060871
  
Corresponding Affymetrix probe sets: 10571815 (MoGene1.0st)   1426442_at (Mouse Genome 430 2.0 Array)   1456741_s_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000033915
NCBI entrez gene - 234267     See in Manteia.
MGI - MGI:107671
RefSeq - NM_153581
RefSeq - NM_001253754
RefSeq - NM_001253756
RefSeq Peptide - NP_001240683
RefSeq Peptide - NP_001240685
RefSeq Peptide - NP_705809
swissprot - P35802
swissprot - Q542P2
Ensembl - ENSMUSG00000031517
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gpm6aaENSDARG00000055455Danio rerio
 gpm6abENSDARG00000004621Danio rerio
 GPM6AENSGALG00000043480Gallus gallus
 GPM6AENSG00000150625Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Gpm6b / P35803 / glycoprotein m6b / Q13491*ENSMUSG0000003134253
Plp1 / P60202 / proteolipid protein (myelin) 1 / P60201* / proteolipid protein 1*ENSMUSG0000003142536


Protein motifs (from Interpro)
Interpro ID Name
 IPR001614  Myelin proteolipid protein PLP
 IPR018237  Myelin proteolipid protein PLP, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001764 neuron migration IEA
 biological_processGO:0003407 neural retina development IDA
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0007416 synapse assembly IEA
 biological_processGO:0048812 neuron projection morphogenesis IDA
 biological_processGO:0048863 stem cell differentiation IEA
 biological_processGO:0051491 positive regulation of filopodium assembly IEA
 biological_processGO:0070588 calcium ion transmembrane transport IEA
 cellular_componentGO:0005886 plasma membrane ISS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030175 filopodium ISS
 cellular_componentGO:0030424 axon IEA
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0043005 neuron projection IEA
 cellular_componentGO:0043025 neuronal cell body IEA
 cellular_componentGO:0043197 dendritic spine IEA
 cellular_componentGO:0044295 axonal growth cone IDA
 molecular_functionGO:0005262 calcium channel activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0003651 abnormal axon outgrowth "defect/abnormality in the ability of an axon to extend from a neuron cell body" [monikat:Monika Tomczuk, Mouse Genome Informatics Curator, J:96121]
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Allelic Composition: Slc6a5m1J/Slc6a5m1J
Genetic Background: involves: 129S2/SvPas * NOD

 MP:0005458 increased percent body fat "more fat, relative to the norm, as a percentage of total body weight" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Kltm1Lex/Kltm1Lex
Genetic Background: involves: 129S5/SvEvBrd * C57BL/6J

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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