ENSMUSG00000031860


Mus musculus

Features
Gene ID: ENSMUSG00000031860
  
Biological name :Pbx4
  
Synonyms : Mus musculus pre B cell leukemia homeobox 4 (Pbx4), transcript variant 4, mRNA. / Pbx4 / Q99NE9
  
Possible biological names infered from orthology : PBX homeobox 4 / Q9BYU1
  
Species: Mus musculus
  
Chr. number: 8
Strand: 1
Band: B3.3
Gene start: 69832491
Gene end: 69872292
  
Corresponding Affymetrix probe sets: 10572241 (MoGene1.0st)   1449916_at (Mouse Genome 430 2.0 Array)   1454912_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000119526
Ensembl peptide - ENSMUSP00000122281
Ensembl peptide - ENSMUSP00000121369
Ensembl peptide - ENSMUSP00000080219
Ensembl peptide - ENSMUSP00000118287
NCBI entrez gene - 80720     See in Manteia.
MGI - MGI:1931321
RefSeq - XM_006509800
RefSeq - XM_006509803
RefSeq - XM_006509802
RefSeq - NM_001024954
RefSeq - NM_001357308
RefSeq Peptide - NP_001020125
RefSeq Peptide - NP_001344237
swissprot - Q99NE9
swissprot - D6RIQ9
swissprot - D3Z318
swissprot - D6RGB0
Ensembl - ENSMUSG00000031860
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pbx4ENSDARG00000052150Danio rerio
 PBX4ENSG00000105717Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Pbx2 / O35984 / pre B cell leukemia homeobox 2 / P40425* / PBX homeobox 2*ENSMUSG0000003467363
Pbx3 / O35317 / Pre-B-cell leukemia transcription factor 3 / P40426* / PBX homeobox 3*ENSMUSG0000003871862
Pbx1 / P41778 / Pre-B-cell leukemia transcription factor 1 / P40424* / PBX homeobox 1*ENSMUSG0000005253461


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR005542  PBX
 IPR009057  Homeobox-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IC
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IC
 cellular_componentGO:0001741 XY body IDA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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