ENSG00000105717


Homo sapiens

Features
Gene ID: ENSG00000105717
  
Biological name :PBX4
  
Synonyms : PBX4 / PBX homeobox 4 / Q9BYU1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: -1
Band: p13.11
Gene start: 19561707
Gene end: 19618916
  
Corresponding Affymetrix probe sets: 230536_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000251203
Ensembl peptide - ENSP00000453069
Ensembl peptide - ENSP00000453348
NCBI entrez gene - 80714     See in Manteia.
OMIM - 608127
RefSeq - XM_017027329
RefSeq - NM_025245
RefSeq - XM_017027326
RefSeq - XM_017027327
RefSeq - XM_017027328
RefSeq - XM_006722911
RefSeq - XM_011528320
RefSeq - XM_011528322
RefSeq Peptide - NP_079521
swissprot - Q9BYU1
swissprot - H0YL59
Ensembl - ENSG00000105717
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pbx4ENSDARG00000052150Danio rerio
 Pbx4ENSMUSG00000031860Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PBX3 / P40426 / PBX homeobox 3ENSG0000016708168
PBX2 / P40425 / PBX homeobox 2ENSG0000020430468
PBX1 / P40424 / PBX homeobox 1ENSG0000018563067


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR005542  PBX
 IPR009057  Homeobox-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006366 transcription by RNA polymerase II IC
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IC
 cellular_componentGO:0001741 XY body IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding ISM
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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