ENSMUSG00000031985


Mus musculus

Features
Gene ID: ENSMUSG00000031985
  
Biological name :Gnpat
  
Synonyms : glyceronephosphate O-acyltransferase / Gnpat / P98192
  
Possible biological names infered from orthology : O15228
  
Species: Mus musculus
  
Chr. number: 8
Strand: 1
Band: E2
Gene start: 124863033
Gene end: 124890057
  
Corresponding Affymetrix probe sets: 10576506 (MoGene1.0st)   1417456_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000034466
Ensembl peptide - ENSMUSP00000125323
NCBI entrez gene - 14712     See in Manteia.
MGI - MGI:1343460
RefSeq - NM_010322
RefSeq Peptide - NP_034452
swissprot - P98192
swissprot - Q05DV2
swissprot - Q545P6
Ensembl - ENSMUSG00000031985
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gnpatENSDARG00000074401Danio rerio
 si:ch73-21k16.5ENSDARG00000078770Danio rerio
 GNPATENSGALG00000011163Gallus gallus
 GNPATENSG00000116906Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Gpam / Q61586 / glycerol-3-phosphate acyltransferase, mitochondrial / Q9HCL2*ENSMUSG0000002497822
Gpat2 / Q14DK4 / glycerol-3-phosphate acyltransferase 2, mitochondrial / Q6NUI2*ENSMUSG0000004633818


Protein motifs (from Interpro)
Interpro ID Name
 IPR002123  Phospholipid/glycerol acyltransferase
 IPR022284  Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase
 IPR028353  Dihydroxyacetone phosphate acyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006650 glycerophospholipid metabolic process IEA
 biological_processGO:0007416 synapse assembly IMP
 biological_processGO:0007584 response to nutrient IEA
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0008611 ether lipid biosynthetic process TAS
 biological_processGO:0021587 cerebellum morphogenesis IMP
 biological_processGO:0030913 paranodal junction assembly IMP
 biological_processGO:0042493 response to drug IEA
 biological_processGO:0042552 myelination IMP
 biological_processGO:0042594 response to starvation IEA
 biological_processGO:0044255 cellular lipid metabolic process IEA
 biological_processGO:0061024 membrane organization IMP
 biological_processGO:0070542 response to fatty acid IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005777 peroxisome ISO
 cellular_componentGO:0005778 peroxisomal membrane IEA
 cellular_componentGO:0005782 peroxisomal matrix TAS
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0003824 catalytic activity IDA
 molecular_functionGO:0005102 signaling receptor binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008374 O-acyltransferase activity IEA
 molecular_functionGO:0016287 glycerone-phosphate O-acyltransferase activity ISO
 molecular_functionGO:0016290 palmitoyl-CoA hydrolase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016746 transferase activity, transferring acyl groups IEA


Pathways (from Reactome)
Pathway description
Synthesis of PA
Plasmalogen biosynthesis
Peroxisomal protein import


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000547 short limbs "reduced average length of the extremities" [MGI:CLS, J:61509]
Show

Allelic Composition: Roratmgc26/Roratmgc26
Genetic Background: involves: D7R75M

 MP:0000852 small cerebellum "reduced size of cerebellum" [MGI:CLS, J:17203, J:67524]
Show

Allelic Composition: Roratmgc26/Roratmgc26
Genetic Background: involves: D7R75M

 MP:0000857 abnormal cerebellar foliation "malformation of small offshoots of the cerebellar lobules" [Principles of Neural Science:ISBN 0-8385-8034-3, J:52951]
Show

Allelic Composition: Roratmgc26/Roratmgc26
Genetic Background: involves: D7R75M

 MP:0000877 abnormal Purkinje cell "any structural anomaly of the neurons located at the interface of the molecular and internal granule layers of the cerebellar cortex; these inhibitory neurons provide the output of the cerebellar cortex through axons that project into the white matter, and extensive dendritic trees from the Purkinje cells extend upward in a single plane into the molecular layer where they synapse with parallel fibers of granule cells" [J:46140, Principles of Neural Science , 3rd edition:ISBN 0-8385-8034-3]
Show

Allelic Composition: Roratmgc26/Roratmgc26
Genetic Background: involves: D7R75M

 MP:0000920 abnormal myelination "atypical or altered myelination in axon sheaths" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Roratmgc26/Roratmgc26
Genetic Background: involves: D7R75M

 MP:0001127 small ovary "reduced size of the female reproductive gland containing the germ cells" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:35782]
Show

Allelic Composition: Roratmgc26/Roratmgc26
Genetic Background: involves: D7R75M

 MP:0001262 decreased body weight "lower than normal average weight " [J:61295]
Show

Allelic Composition: Roratmgc26/Roratmgc26
Genetic Background: involves: D7R75M

 MP:0001289 persistence of hyaloid capillary system "failure of the degeneration of the transient vascular system of the eye during development" [J:49840]
Show

Allelic Composition: Roratmgc26/Roratmgc26
Genetic Background: involves: D7R75M

 MP:0001297 microphthalmia "reduced average size of the eyes" [J:18048]
Show

Allelic Composition: Roratmgc26/Roratmgc26
Genetic Background: involves: D7R75M

 MP:0001304 cataracts "complete or partial opacity of the lens" [J:65031]
Show

Allelic Composition: Roratmgc26/Roratmgc26
Genetic Background: involves: D7R75M

 MP:0001732 postnatal growth retardation "slow or limited development after birth " [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Roratmgc26/Roratmgc26
Genetic Background: involves: D7R75M

 MP:0001925 male infertility "inability of male to produce live offspring" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:60409]
Show

Allelic Composition: Roratmgc26/Roratmgc26
Genetic Background: involves: D7R75M

 MP:0002083 premature death "death after 3 weeks of age, but before normal life span" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Roratmgc26/Roratmgc26
Genetic Background: involves: D7R75M

 MP:0002118 abnormal lipid homeostasis "anomaly in the state of equilibrium in the body with respect to lipids in the fluids and tissues" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Roratmgc26/Roratmgc26
Genetic Background: involves: D7R75M

 MP:0002175 low brain weight "lower than average weight of the brain" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Roratmgc26/Roratmgc26
Genetic Background: involves: D7R75M

 MP:0002216 abnormal seminiferous tubule morphology "malformation of the tubules in the testes where spermatogenesis occurs" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Roratmgc26/Roratmgc26
Genetic Background: involves: D7R75M

 MP:0002427 dwarfism "abnormally undersized with disproportionate body parts" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Roratmgc26/Roratmgc26
Genetic Background: involves: D7R75M

 MP:0002794 lenticonus "a conical bulging of the lens capsule and the underlying cortex of the eye" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8]
Show

Allelic Composition: Roratmgc26/Roratmgc26
Genetic Background: involves: D7R75M

 MP:0005159 azoospermia "absence of living spermatozoa " [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Roratmgc26/Roratmgc26
Genetic Background: involves: D7R75M

 MP:0005201 abnormal retinal pigment epithelium morphology "anomaly in the epithelial layer of the retina composed of cells containing pigment granules " [MeSH:National Library of Medicine - Medical Subject Headings , 2003]
Show

Allelic Composition: Roratmgc26/Roratmgc26
Genetic Background: involves: D7R75M

 MP:0005205 abnormal eye anterior chamber "anomaly of the space in the eye, filled with aqueous humor, and bounded anteriorly by the cornea and a small portion of the sclera and posteriorly by a small portion of the ciliary body, the iris, and part of the crystalline lens" [MeSH:National Library of Medicine - Medical Subject Headings , 2003]
Show

Allelic Composition: Roratmgc26/Roratmgc26
Genetic Background: involves: D7R75M

 MP:0006221 optic nerve hypoplasia "less than the normal number of fibers in the optic nerve" [ncbi:Matthew Mailman, NCBI request, smb:Susan M Bello, Mouse Genome Informatics Curator]
Show

Allelic Composition: Roratmgc26/Roratmgc26
Genetic Background: involves: D7R75M

 MP:0008261 arrest of male meiosis "cessation of the progression of the process of nuclear division that results in sperm with one half the normal chromosome number of the original cell" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition"]
Show

Allelic Composition: Roratmgc26/Roratmgc26
Genetic Background: involves: D7R75M

 MP:0008540 abnormal cerebrum morphology "any structural anomaly of the largest part of the brain, derived from the telencephalon, and is composed of a right and a left hemisphere each which contains an outer cerebral cortex and a subcortical basal ganglia; cerebral functions include sensorimotor, emotional, and intellectual activities" [MESH:A08.186.211.730.885.287]
Show

Allelic Composition: Roratmgc26/Roratmgc26
Genetic Background: involves: D7R75M

 MP:0008814 reduced nerve conduction velocity "decrease in the rate at which an eletrical impulse travels through a nerve" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Roratmgc26/Roratmgc26
Genetic Background: involves: D7R75M

 MP:0009977 abnormal cerebellar granule cell migration "defective or impaired movement of cerebellar granule cell neurons from the germinal zone into the granule cell layer of the cerebellum during development of the cerebellar cortex" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Roratmgc26/Roratmgc26
Genetic Background: involves: D7R75M

 MP:0010734 abnormal paranode morphology "any structural anomaly of the axon region immediately adjacent to nodes of Ranvier, where a series of cytoplasmic loops from the overlying glial cell form septate-like junctions with the axon; the axoglial junctions act as a diffusion barrier between the node and internode" [PMID:16224497]
Show

Allelic Composition: Roratmgc26/Roratmgc26
Genetic Background: involves: D7R75M

 MP:0010735 abnormal paranodal axoglial junction morphology "any structural anomaly of the structure in which the myelin sheath attaches to the axon at each end of each myelin segment; the axoglial junctions act as a diffusion barrier between the node and internode, maintaining domain-specific axolemmal membrane components" [PMID:19224642]
Show

Allelic Composition: Roratmgc26/Roratmgc26
Genetic Background: involves: D7R75M

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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