ENSMUSG00000034040


Mus musculus

Features
Gene ID: ENSMUSG00000034040
  
Biological name :Galnt17
  
Synonyms : Galnt17 / Polypeptide N-acetylgalactosaminyltransferase 17 / Q7TT15
  
Possible biological names infered from orthology : Q6IS24
  
Species: Mus musculus
  
Chr. number: 5
Strand: -1
Band: G2
Gene start: 130872082
Gene end: 131308497
  
Corresponding Affymetrix probe sets: 10534152 (MoGene1.0st)   
  
Cross references: Ensembl peptide - ENSMUSP00000125395
Ensembl peptide - ENSMUSP00000083187
NCBI entrez gene - 212996     See in Manteia.
MGI - MGI:2137594
RefSeq - NM_145218
RefSeq Peptide - NP_660253
swissprot - E9Q714
swissprot - Q59J92
swissprot - Q7TT15
Ensembl - ENSMUSG00000034040
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 galnt17ENSDARG00000042418Danio rerio
 GALNT17ENSGALG00000001130Gallus gallus
 Q6IS24ENSG00000185274Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Galnt9 / polypeptide N-acetylgalactosaminyltransferase 9 / Q9HCQ5*ENSMUSG0000003331662
Q8K1B9 / Galnt18 / Polypeptide N-acetylgalactosaminyltransferase 18 / Q6P9A2*ENSMUSG0000003829649
Q6P9S7 / Galnt10 / Polypeptide N-acetylgalactosaminyltransferase 10 / Q86SR1*ENSMUSG0000002052032
Galntl6 / polypeptide N-acetylgalactosaminyltransferase like 6 / Q49A17*ENSMUSG0000009691432
Galnt7 / Q80VA0 / N-acetylgalactosaminyltransferase 7 / Q86SF2* / polypeptide N-acetylgalactosaminyltransferase 7*ENSMUSG0000003160829
Q9D2N8 / Galnt15 / Polypeptide N-acetylgalactosaminyltransferase 15 / Q8N3T1*ENSMUSG0000002190328


Protein motifs (from Interpro)
Interpro ID Name
 IPR000772  Ricin B, lectin domain
 IPR001173  Glycosyltransferase 2-like
 IPR029044  Nucleotide-diphospho-sugar transferases
 IPR035992  Ricin B-like lectins


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006486 protein glycosylation IEA
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0004653 polypeptide N-acetylgalactosaminyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA
 molecular_functionGO:0030246 carbohydrate binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
O-linked glycosylation of mucins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002764 short tibia " reduced length of the medial and larger bone of the lower leg" [J:12736, pvb:Pierre Vanden Borre , Mouse Genome Informatics Curator]
Show

Allelic Composition: Tcf7l2tm1a(EUCOMM)Wtsi/Tcf7l2+
Genetic Background: C57BL/6N-Tcf7l2tm1a(EUCOMM)Wtsi/Wtsi

 MP:0010053 decreased grip strength "reduced ability to grasp and hold objects, often measured as time spent hanging from an object or wire" [ISBN:0471316393 "Crawley, JN, What s Wrong with my Mouse: Behavioral Phenotyping of Transgenic and Knockout Mice"]
Show

Allelic Composition: Tcf7l2tm1a(EUCOMM)Wtsi/Tcf7l2+
Genetic Background: C57BL/6N-Tcf7l2tm1a(EUCOMM)Wtsi/Wtsi

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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