ENSMUSG00000038132


Mus musculus

Features
Gene ID: ENSMUSG00000038132
  
Biological name :Rbm24
  
Synonyms : D3Z4I3 / Rbm24 / RNA-binding protein 24
  
Possible biological names infered from orthology : Q9BX46 / RNA binding motif protein 24
  
Species: Mus musculus
  
Chr. number: 13
Strand: 1
Band: A5
Gene start: 46418434
Gene end: 46431095
  
Corresponding Affymetrix probe sets: 10404904 (MoGene1.0st)   1443715_at (Mouse Genome 430 2.0 Array)   1454752_at (Mouse Genome 430 2.0 Array)   1456180_at (Mouse Genome 430 2.0 Array)   1456491_at (Mouse Genome 430 2.0 Array)   1458624_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000043120
NCBI entrez gene - 666794     See in Manteia.
MGI - MGI:3610364
RefSeq - NM_001081425
RefSeq Peptide - NP_001074894
swissprot - D3Z4I3
Ensembl - ENSMUSG00000038132
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q76LC6ENSDARG00000102995Danio rerio
 rbm24bENSDARG00000031809Danio rerio
 RBM24ENSGALG00000012712Gallus gallus
 RBM24ENSG00000112183Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Rbm38 / Q62176 / RNA-binding protein 38 / Q9H0Z9* / RNA binding motif protein 38*ENSMUSG0000002751068


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010830 regulation of myotube differentiation IMP
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0043488 regulation of mRNA stability IMP
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003730 mRNA 3"-UTR binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000299 failure of endocardial cushion closure "failure of the mounds of embryonic connective tissue that bulge into the embryonic atrioventricular canal to fuse to form the valves between the right and left atrioventricular orifices" [J:29971]
Show

Allelic Composition: Cdkn1btm1Kin/Cdkn1btm1Kin,Zfp949tm1Htno/Zfp949tm1Htno
Genetic Background: involves: 129P2/OlaHsd * 129S1/Sv * 129X1/SvJ

 MP:0000300 thin endocardial cushion "reduced thickness of the mounds of embryonic connective tissue that bulge into the embryonic atrioventricular canal" [J:45302]
Show

Allelic Composition: Cdkn1btm1Kin/Cdkn1btm1Kin,Zfp949tm1Htno/Zfp949tm1Htno
Genetic Background: involves: 129P2/OlaHsd * 129S1/Sv * 129X1/SvJ

 MP:0003984 embryonic growth retardation "slow or limited development before birth" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Cdkn1btm1Kin/Cdkn1btm1Kin,Zfp949tm1Htno/Zfp949tm1Htno
Genetic Background: involves: 129P2/OlaHsd * 129S1/Sv * 129X1/SvJ

 MP:0004201 fetal growth retardation "slow or limited development during the fetal period (sensu Mus: from E14 through birth)" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Rbm24tm1.1Xch/Rbm24tm1.1Xch,Trp53tm1Tyj/Trp53tm1Tyj
Genetic Background: involves: 129S2/SvPas * C57BL/6 * FVB/N

 MP:0010503 myocardial trabeculae hypoplasia "underdevelopment or reduced size of the supporting bundles of muscular fibers lining the walls of the heart, usually due to a reduced number of cells" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Cdkn1btm1Kin/Cdkn1btm1Kin,Zfp949tm1Htno/Zfp949tm1Htno
Genetic Background: involves: 129P2/OlaHsd * 129S1/Sv * 129X1/SvJ

 MP:0010769 abnormal survival "deviation from the expected viability or life span of an organism" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Rbm24tm1.1Xch/Rbm24tm1.1Xch,Trp53tm1Tyj/Trp53tm1Tyj
Genetic Background: involves: 129S2/SvPas * C57BL/6 * FVB/N

 MP:0011098 complete embryonic lethality during organogenesis "death of all organisms of a given genotype in a population between embryo turning and the completion of organogenesis (Mus: E9 to less than E14)" [MGI:csmith]
Show

Allelic Composition: Cdkn1btm1Kin/Cdkn1btm1Kin,Zfp949tm1Htno/Zfp949tm1Htno
Genetic Background: involves: 129P2/OlaHsd * 129S1/Sv * 129X1/SvJ

 MP:0013504 increased embryonic tissue cell apoptosis "increase in the timing or the number of cells in embryonic tissue undergoing programmed cell death" [MGI:csmith]
Show

Allelic Composition: Cdkn1btm1Kin/Cdkn1btm1Kin,Zfp949tm1Htno/Zfp949tm1Htno
Genetic Background: involves: 129P2/OlaHsd * 129S1/Sv * 129X1/SvJ

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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