ENSMUSG00000038453


Mus musculus

Features
Gene ID: ENSMUSG00000038453
  
Biological name :Srcin1
  
Synonyms : Srcin1 / SRC kinase signaling inhibitor 1
  
Possible biological names infered from orthology : Q9C0H9
  
Species: Mus musculus
  
Chr. number: 11
Strand: -1
Band: D
Gene start: 97509340
Gene end: 97576186
  
Corresponding Affymetrix probe sets: 10390430 (MoGene1.0st)   1420706_at (Mouse Genome 430 2.0 Array)   1436621_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000146591
Ensembl peptide - ENSMUSP00000103222
Ensembl peptide - ENSMUSP00000103216
Ensembl peptide - ENSMUSP00000103219
Ensembl peptide - ENSMUSP00000116444
NCBI entrez gene - 56013     See in Manteia.
MGI - MGI:1933179
RefSeq - XM_017314683
RefSeq - XM_017314677
RefSeq - XM_017314678
RefSeq - XM_017314679
RefSeq - XM_017314680
RefSeq - XM_017314681
RefSeq - XM_017314682
RefSeq - NM_018873
RefSeq - XM_006533765
RefSeq - XM_006533779
RefSeq - XM_006533781
RefSeq - XM_006533782
RefSeq - XM_006533783
RefSeq - XM_017314666
RefSeq - XM_017314667
RefSeq - XM_017314668
RefSeq - XM_017314669
RefSeq - XM_017314670
RefSeq - XM_017314671
RefSeq - XM_017314672
RefSeq - XM_017314673
RefSeq - XM_017314674
RefSeq - XM_017314675
RefSeq Peptide - NP_061361
swissprot - B1AQX9
swissprot - B1AQX8
swissprot - B1AQX7
swissprot - B1AQX6
swissprot - A0A140LHX7
Ensembl - ENSMUSG00000038453
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:ch211-278a6.1ENSDARG00000059773Danio rerio
 zgc:114120ENSDARG00000101812Danio rerio
 SRCIN1ENSGALG00000032628Gallus gallus
 Q9C0H9ENSG00000277363Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Etl4 / A2AQ25 / Sickle tail protein / Q5T5P2* / KIAA1217*ENSMUSG0000003661735


Protein motifs (from Interpro)
Interpro ID Name
 IPR022782  Actin interacting protein 3-like, C-terminal
 IPR026727  SRC kinase signalling inhibitor 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030334 regulation of cell migration IEA
 biological_processGO:0034446 substrate adhesion-dependent cell spreading IEA
 biological_processGO:0050709 negative regulation of protein secretion IEA
 biological_processGO:0061001 regulation of dendritic spine morphogenesis IEA
 biological_processGO:0061098 positive regulation of protein tyrosine kinase activity IEA
 biological_processGO:0061099 negative regulation of protein tyrosine kinase activity IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0014069 postsynaptic density IEA
 cellular_componentGO:0015629 actin cytoskeleton IEA
 cellular_componentGO:0030027 lamellipodium IEA
 cellular_componentGO:0030175 filopodium IEA
 cellular_componentGO:0030424 axon IEA
 cellular_componentGO:0030425 dendrite IEA
 cellular_componentGO:0043005 neuron projection IEA
 cellular_componentGO:0043025 neuronal cell body IEA
 cellular_componentGO:0045202 synapse IEA
 molecular_functionGO:0019901 protein kinase binding IEA
 molecular_functionGO:0019904 protein domain specific binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001458 abnormal object recognition memory "defects in the ability to recognize objects that the animal has previously encountered; recognition is measured by relative amount of time exploring objects, which should decrease upon subsequent or multiple presentations of the same object when presented with novel objects at the same time" [CFG:Center for Functional Genomics , Northwestern University]
Show

Allelic Composition: Meis1tm1Mtor/Meis1tm1Mtor
Genetic Background: Not Specified

 MP:0001473 reduced long term potentiation "less than the normal persistent robust synaptic response induced by synchronous stimulation of pre- and postsynaptic cells " [Principles of Neural Science:ISBN 0-8385-8034-3]
Show

Allelic Composition: Meis1tm1Mtor/Meis1tm1Mtor
Genetic Background: Not Specified

 MP:0001475 reduced long term depression "less than the normal, persistent activity-dependent decrease in synaptic efficacy between neurons, often following slow, weak stimulation of CA1 neurons" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator, Principles of Neural Science:ISBN 0-8385-8034-3]
Show

Allelic Composition: Meis1tm1Mtor/Meis1tm1Mtor
Genetic Background: Not Specified

 MP:0001900 impaired synaptic plasticity "decreased or inability of the nervous system to change its reactivity as a result of successive activations " [MeSH:National Library of Medicine - Medical Subject Headings , 2003, cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Meis1tm1Mtor/Meis1tm1Mtor
Genetic Background: Not Specified

 MP:0002206 abnormal CNS synaptic transmission "defect in the communication from a neuron to a target across a synapse in the central nervous system" [MeSH:National Library of Medicine - Medical Subject Headings , 2003]
Show

Allelic Composition: Meis1tm1Mtor/Meis1tm1Mtor
Genetic Background: Not Specified

 MP:0002804 abnormal motor learning "defects in the ability to repeat a motor task requiring well coordinated movements and balance; measures cerebellar dependent learning" [CFG:Center for Functional Genomics , Northwestern University]
Show

Allelic Composition: Meis1tm1Mtor/Meis1tm1Mtor
Genetic Background: Not Specified

 MP:0002833 increased heart weight "greater than average weight of the heart compared to the average for a particular strain" [RGD:Rat Genome Database submission]
Show

Allelic Composition: Spata22tm1b(KOMP)Wtsi/Spata22tm1b(KOMP)Wtsi
Genetic Background: C57BL/6N-Spata22tm1b(KOMP)Wtsi/Ucd

 MP:0002912 abnormal excitatory postsynaptic potential "defect in the potential detected in postsynaptic cells when an excitatory impulse arrives at the synapse causing depolarization" [Principles of Neural Science , 3rd edition:ISBN 0-8385-8034-3]
Show

Allelic Composition: Meis1tm1Mtor/Meis1tm1Mtor
Genetic Background: Not Specified

 MP:0003898 abnormal QRS complex "anomaly in the largest-amplitude portion of the ECG, caused by currents generated when the ventricles depolarise prior to their contraction" [monikat:Monika Tomczuk, Mouse Genome Informatics Curator]
Show

Allelic Composition: Spata22tm1b(KOMP)Wtsi/Spata22tm1b(KOMP)Wtsi
Genetic Background: C57BL/6N-Spata22tm1b(KOMP)Wtsi/Ucd

 MP:0009936 abnormal dendritic spine morphology "any structural anomaly of the small membranous protrusion from the dendrite of a neuron that is involved in synaptic transmission; it typically receives input from a single synapse of an axon" [MGI:llw2 "Linda Washburn, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Meis1tm1Mtor/Meis1tm1Mtor
Genetic Background: Not Specified

Allelic Composition: Srcin1tm1Fdc/Srcin1+
Genetic Background: Not Specified

 MP:0010025 decreased total body fat amount "less than the normal total amount of connective tissue composed of fat cells within the entire body" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Spata22tm1b(KOMP)Wtsi/Spata22tm1b(KOMP)Wtsi
Genetic Background: C57BL/6N-Spata22tm1b(KOMP)Wtsi/Ucd

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr