ENSMUSG00000038540


Mus musculus

Features
Gene ID: ENSMUSG00000038540
  
Biological name :Tmc3
  
Synonyms : Tmc3 / transmembrane channel like 3
  
Possible biological names infered from orthology : Q7Z5M5
  
Species: Mus musculus
  
Chr. number: 7
Strand: 1
Band: D3
Gene start: 83584927
Gene end: 83625614
  
Corresponding Affymetrix probe sets: 10554667 (MoGene1.0st)   
  
Cross references: Ensembl peptide - ENSMUSP00000046028
Ensembl peptide - ENSMUSP00000130348
NCBI entrez gene - 233424     See in Manteia.
MGI - MGI:2669033
RefSeq - XM_006507591
RefSeq - NM_177695
RefSeq Peptide - NP_808363
swissprot - E9Q6Y0
swissprot - F8VQI4
Ensembl - ENSMUSG00000038540
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:dkey-15b23.3ENSDARG00000090696Danio rerio
 TMC3ENSGALG00000006376Gallus gallus
 TMC3ENSG00000188869Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Tmc2 / Q8R4P4 / Transmembrane channel-like protein 2 / Q8TDI7* / transmembrane channel like 2*ENSMUSG0000006033228
Tmc1 / Q8R4P5 / Transmembrane channel-like protein 1 / Q8TDI8* / transmembrane channel like 1*ENSMUSG0000002474925
Tmc7 / Q8C428 / Transmembrane channel-like protein 7 / Q7Z402* / transmembrane channel like 7*ENSMUSG0000004224616
Tmc5 / Q32NZ6 / Transmembrane channel-like protein 5 / Q6UXY8* / transmembrane channel like 5*ENSMUSG0000003065015
Tmc8 / Q7TN58 / Transmembrane channel-like protein 8 / Q8IU68* / transmembrane channel like 8*ENSMUSG0000005010615
Tmc6 / Q7TN60 / transmembrane channel-like gene family 6 / Q7Z403* / transmembrane channel like 6*ENSMUSG0000002557214
Tmc4 / transmembrane channel like 4ENSMUSG0000001973414


Protein motifs (from Interpro)
Interpro ID Name
 IPR012496  TMC domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr