ENSMUSG00000030650


Mus musculus

Features
Gene ID: ENSMUSG00000030650
  
Biological name :Tmc5
  
Synonyms : Q32NZ6 / Tmc5 / Transmembrane channel-like protein 5
  
Possible biological names infered from orthology : Q6UXY8 / transmembrane channel like 5
  
Species: Mus musculus
  
Chr. number: 7
Strand: 1
Band: F2
Gene start: 118597297
Gene end: 118675086
  
Corresponding Affymetrix probe sets: 10556616 (MoGene1.0st)   1452934_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000118541
Ensembl peptide - ENSMUSP00000049784
Ensembl peptide - ENSMUSP00000095694
Ensembl peptide - ENSMUSP00000112434
Ensembl peptide - ENSMUSP00000114137
NCBI entrez gene - 74424     See in Manteia.
MGI - MGI:1921674
RefSeq - XM_011241924
RefSeq - XM_006508253
RefSeq - NM_028930
RefSeq - NM_001105252
RefSeq Peptide - NP_083206
RefSeq Peptide - NP_001098722
swissprot - Q32NZ6
swissprot - D3Z0S8
Ensembl - ENSMUSG00000030650
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:dkey-202l16.5ENSDARG00000013252Danio rerio
 TMC5ENSGALG00000006911Gallus gallus
 TMC5ENSG00000103534Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Tmc6 / Q7TN60 / transmembrane channel-like gene family 6 / Q7Z403* / transmembrane channel like 6*ENSMUSG0000002557226
Tmc3 / transmembrane channel like 3 / Q7Z5M5*ENSMUSG0000003854017
Tmc7 / Q8C428 / Transmembrane channel-like protein 7 / Q7Z402* / transmembrane channel like 7*ENSMUSG0000004224617
Tmc2 / Q8R4P4 / Transmembrane channel-like protein 2 / Q8TDI7* / transmembrane channel like 2*ENSMUSG0000006033216
Tmc4 / transmembrane channel like 4ENSMUSG0000001973416
Tmc8 / Q7TN58 / Transmembrane channel-like protein 8 / Q8IU68* / transmembrane channel like 8*ENSMUSG0000005010615
Tmc1 / Q8R4P5 / Transmembrane channel-like protein 1 / Q8TDI8* / transmembrane channel like 1*ENSMUSG0000002474914


Protein motifs (from Interpro)
Interpro ID Name
 IPR012496  TMC domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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