ENSG00000103534


Homo sapiens

Features
Gene ID: ENSG00000103534
  
Biological name :TMC5
  
Synonyms : Q6UXY8 / TMC5 / transmembrane channel like 5
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: 1
Band: p12.3
Gene start: 19410496
Gene end: 19499113
  
Corresponding Affymetrix probe sets: 219580_s_at (Human Genome U133 Plus 2.0 Array)   222904_s_at (Human Genome U133 Plus 2.0 Array)   236983_at (Human Genome U133 Plus 2.0 Array)   240303_at (Human Genome U133 Plus 2.0 Array)   240304_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000461008
Ensembl peptide - ENSP00000219821
Ensembl peptide - ENSP00000370822
Ensembl peptide - ENSP00000379531
Ensembl peptide - ENSP00000456148
Ensembl peptide - ENSP00000458240
Ensembl peptide - ENSP00000441227
Ensembl peptide - ENSP00000446274
Ensembl peptide - ENSP00000454710
NCBI entrez gene - 79838     See in Manteia.
OMIM - 617197
RefSeq - NM_001105248
RefSeq - NM_001261841
RefSeq - NM_001308161
RefSeq - NM_024780
RefSeq - NM_001105249
RefSeq Peptide - NP_001098718
RefSeq Peptide - NP_001248770
RefSeq Peptide - NP_001295090
RefSeq Peptide - NP_079056
RefSeq Peptide - NP_001098719
swissprot - Q6UXY8
swissprot - F5GYU8
swissprot - H3BN68
swissprot - I3L0P3
swissprot - I3L469
Ensembl - ENSG00000103534
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:dkey-202l16.5ENSDARG00000013252Danio rerio
 TMC5ENSGALG00000006911Gallus gallus
 Tmc5ENSMUSG00000030650Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TMC6 / Q7Z403 / transmembrane channel like 6ENSG0000014152425
TMC3 / Q7Z5M5 / transmembrane channel like 3ENSG0000018886917
TMC7 / Q7Z402 / transmembrane channel like 7ENSG0000017053716
TMC2 / Q8TDI7 / transmembrane channel like 2ENSG0000014948815
TMC4 / transmembrane channel like 4ENSG0000016760815
TMC8 / Q8IU68 / transmembrane channel like 8ENSG0000016789515
TMC1 / Q8TDI8 / transmembrane channel like 1ENSG0000016509114


Protein motifs (from Interpro)
Interpro ID Name
 IPR012496  TMC domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0070062 extracellular exosome HDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr