ENSGALG00000006911


Gallus gallus

Features
Gene ID: ENSGALG00000006911
  
Biological name :TMC5
  
Synonyms : TMC5 / transmembrane channel like 5
  
Possible biological names infered from orthology : Q32NZ6 / Q6UXY8 / Transmembrane channel-like protein 5
  
Species: Gallus gallus
  
Chr. number: 14
Strand: 1
Band:
Gene start: 8539866
Gene end: 8565249
  
Corresponding Affymetrix probe sets: GgaAffx.4323.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000011186
Ensembl peptide - ENSGALP00000057264
NCBI entrez gene - 416611     See in Manteia.
RefSeq - XM_015294539
RefSeq - XM_015294540
RefSeq - XM_015294541
RefSeq - XM_414913
RefSeq - XM_004945295
RefSeq - XM_004945296
swissprot - F1NIK1
Ensembl - ENSGALG00000006911
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:dkey-202l16.5ENSDARG00000013252Danio rerio
 TMC5ENSG00000103534Homo sapiens
 Tmc5ENSMUSG00000030650Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TMC6 / transmembrane channel like 6 / Q7TN60* / Q7Z403* / transmembrane channel-like gene family 6*ENSGALG0000003887528
TMC3 / transmembrane channel-like protein 3 / Q7Z5M5* / transmembrane channel like 3*ENSGALG0000000637618
TMC7 / transmembrane channel like 7 / Q7Z402* / Q8C428* / Transmembrane channel-like protein 7 *ENSGALG0000000688917
TMC1 / transmembrane channel-like protein 1 / Q8R4P5* / Q8TDI8* / transmembrane channel like 1*ENSGALG0000001514516
TMC2 / transmembrane channel-like protein 2 / Q8R4P4* / Q8TDI7* / transmembrane channel like 2*ENSGALG0000004270616


Protein motifs (from Interpro)
Interpro ID Name
 IPR012496  TMC domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr