ENSMUSG00000038725


Mus musculus

Features
Gene ID: ENSMUSG00000038725
  
Biological name :Pkhd1l1
  
Synonyms : Fibrocystin-L / Pkhd1l1 / Q80ZA4
  
Possible biological names infered from orthology : PKHD1 like 1 / Q86WI1
  
Species: Mus musculus
  
Chr. number: 15
Strand: 1
Band: B3.2
Gene start: 44457553
Gene end: 44601369
  
Corresponding Affymetrix probe sets: 10423971 (MoGene1.0st)   1421696_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000036988
Ensembl peptide - ENSMUSP00000129522
Ensembl peptide - ENSMUSP00000147447
NCBI entrez gene - 192190     See in Manteia.
MGI - MGI:2183153
RefSeq - XM_011245522
RefSeq - NM_138674
RefSeq Peptide - NP_619615
swissprot - E9PUU8
swissprot - Q80ZA4
swissprot - F8WH29
Ensembl - ENSMUSG00000038725
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pkhd1l1ENSDARG00000091116Danio rerio
 si:ch211-244a23.1ENSDARG00000040004Danio rerio
 Q86WI1ENSG00000205038Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Pkhd1 / PKHD1, fibrocystin/polyductin / P08F94*ENSMUSG0000004376023
Cemip / Q8BI06 / Cell migration-inducing and hyaluronan-binding protein / Q8WUJ3* / cell migration inducing hyaluronan binding protein*ENSMUSG000000523537
Tmem2 / Q5FWI3 / Cell surface hyaluronidase / Q9UHN6* / transmembrane protein 2*ENSMUSG000000247547


Protein motifs (from Interpro)
Interpro ID Name
 IPR002909  IPT domain
 IPR006626  Parallel beta-helix repeat
 IPR008972  Cupredoxin
 IPR011050  Pectin lyase fold/virulence factor
 IPR011658  PA14 domain
 IPR012334  Pectin lyase fold
 IPR013783  Immunoglobulin-like fold
 IPR014756  Immunoglobulin E-set
 IPR019316  G8 domain
 IPR029927  Fibrocystin-L
 IPR037524  PA14/GLEYA domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005929 cilium IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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