ENSG00000205038


Homo sapiens

Features
Gene ID: ENSG00000205038
  
Biological name :PKHD1L1
  
Synonyms : PKHD1L1 / PKHD1 like 1 / Q86WI1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 8
Strand: 1
Band: q23.1
Gene start: 109362477
Gene end: 109530330
  
Corresponding Affymetrix probe sets: 230673_at (Human Genome U133 Plus 2.0 Array)   242763_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000367655
Ensembl peptide - ENSP00000437376
NCBI entrez gene - 93035     See in Manteia.
OMIM - 607843
RefSeq - XM_017013973
RefSeq - NM_177531
RefSeq - XM_017013970
RefSeq - XM_017013971
RefSeq - XM_017013972
RefSeq - XM_011517371
RefSeq - XM_017013969
RefSeq Peptide - NP_803875
swissprot - Q86WI1
swissprot - H0YF65
Ensembl - ENSG00000205038
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pkhd1l1ENSDARG00000091116Danio rerio
 si:ch211-244a23.1ENSDARG00000040004Danio rerio
 Q80ZA4ENSMUSG00000038725Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PKHD1 / P08F94 / PKHD1, fibrocystin/polyductinENSG0000017092724
CEMIP / Q8WUJ3 / cell migration inducing hyaluronan binding proteinENSG000001038887
TMEM2 / Q9UHN6 / transmembrane protein 2ENSG000001350487


Protein motifs (from Interpro)
Interpro ID Name
 IPR002909  IPT domain
 IPR006626  Parallel beta-helix repeat
 IPR008972  Cupredoxin
 IPR011050  Pectin lyase fold/virulence factor
 IPR011658  PA14 domain
 IPR012334  Pectin lyase fold
 IPR013783  Immunoglobulin-like fold
 IPR014756  Immunoglobulin E-set
 IPR019316  G8 domain
 IPR029927  Fibrocystin-L
 IPR037524  PA14/GLEYA domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006955 immune response NAS
 cellular_componentGO:0005615 extracellular space NAS
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005929 cilium IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane NAS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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