ENSMUSG00000039148


Mus musculus

Features
Gene ID: ENSMUSG00000039148
  
Biological name :Sart1
  
Synonyms : Q9Z315 / Sart1 / U4/U6.U5 tri-snRNP-associated protein 1
  
Possible biological names infered from orthology : O43290 / SART1, U4/U6.U5 tri-snRNP-associated protein 1
  
Species: Mus musculus
  
Chr. number: 19
Strand: -1
Band: A
Gene start: 5377523
Gene end: 5388703
  
Corresponding Affymetrix probe sets: 10465011 (MoGene1.0st)   1442284_at (Mouse Genome 430 2.0 Array)   1448658_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000047397
NCBI entrez gene - 20227     See in Manteia.
MGI - MGI:1309453
RefSeq - NM_016882
RefSeq Peptide - NP_058578
swissprot - Q9Z315
Ensembl - ENSMUSG00000039148
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sart1ENSDARG00000005945Danio rerio
 SART1ENSG00000175467Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR005011  SNU66/SART1 family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000387 spliceosomal snRNP assembly IBA
 biological_processGO:0000398 mRNA splicing, via spliceosome IEA
 biological_processGO:0000481 maturation of 5S rRNA IBA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0045292 mRNA cis splicing, via spliceosome IBA
 biological_processGO:0045585 positive regulation of cytotoxic T cell differentiation IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005681 spliceosomal complex IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0015030 Cajal body IEA
 cellular_componentGO:0016607 nuclear speck IEA
 cellular_componentGO:0046540 U4/U6 x U5 tri-snRNP complex IBA
 cellular_componentGO:0071013 catalytic step 2 spliceosome IEA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr