ENSMUSG00000039501


Mus musculus

Features
Gene ID: ENSMUSG00000039501
  
Biological name :Znfx1
  
Synonyms : Q8R151 / zinc finger, NFX1-type containing 1 / Znfx1
  
Possible biological names infered from orthology : Q9P2E3
  
Species: Mus musculus
  
Chr. number: 2
Strand: -1
Band: H3
Gene start: 167035793
Gene end: 167063015
  
Corresponding Affymetrix probe sets: 10489850 (MoGene1.0st)   1427091_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000049404
Ensembl peptide - ENSMUSP00000121750
Ensembl peptide - ENSMUSP00000121598
Ensembl peptide - ENSMUSP00000072867
NCBI entrez gene - 98999     See in Manteia.
MGI - MGI:2138982
RefSeq - XM_006500456
RefSeq - NM_001033196
RefSeq - NM_001291162
RefSeq Peptide - NP_001028368
RefSeq Peptide - NP_001278091
swissprot - Q8R151
swissprot - A2A5R6
swissprot - A2A5R4
swissprot - A2A5R5
Ensembl - ENSMUSG00000039501
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 znfx1ENSDARG00000100280Danio rerio
 ZNFX1ENSGALG00000004859Gallus gallus
 ZNFX1ENSG00000124201Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Aqr / Q8CFQ3 / Intron-binding protein aquarius / O60306* / aquarius intron-binding spliceosomal factor*ENSMUSG0000004038314
Setx / A2AKX3 / Probable helicase senataxin / Q7Z333* / senataxin*ENSMUSG0000004353512


Protein motifs (from Interpro)
Interpro ID Name
 IPR000967  Zinc finger, NF-X1-type
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr