ENSMUSG00000039699


Mus musculus

Features
Gene ID: ENSMUSG00000039699
  
Biological name :Batf2
  
Synonyms : Batf2 / Mus musculus basic leucine zipper transcription factor, ATF-like 2 (Batf2), transcript variant 2, mRNA. / Q8R1H8
  
Possible biological names infered from orthology : basic leucine zipper ATF-like transcription factor 2 / Q8N1L9
  
Species: Mus musculus
  
Chr. number: 19
Strand: 1
Band: A
Gene start: 6140983
Gene end: 6172476
  
Corresponding Affymetrix probe sets: 10460767 (MoGene1.0st)   1430005_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000045744
NCBI entrez gene - 74481     See in Manteia.
MGI - MGI:1921731
RefSeq - XM_017318301
RefSeq - NM_001356604
RefSeq - NM_028967
RefSeq - XM_006531851
RefSeq - XM_006531852
RefSeq Peptide - NP_001343533
RefSeq Peptide - NP_083243
swissprot - Q8R1H8
Ensembl - ENSMUSG00000039699
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:dkey-23i12.7ENSDARG00000105562Danio rerio
 BATF2ENSG00000168062Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Batf / O35284 / Basic leucine zipper transcriptional factor ATF-like / Q16520* / basic leucine zipper ATF-like transcription factor*ENSMUSG0000003426617
Batf3 / Q9D275 / Basic leucine zipper transcriptional factor ATF-like 3 / Q9NR55* / basic leucine zipper ATF-like transcription factor 3*ENSMUSG0000002663016


Protein motifs (from Interpro)
Interpro ID Name
 IPR000837  AP-1 transcription factor
 IPR004827  Basic-leucine zipper domain
 IPR029857  Basic leucine zipper transcriptional factor ATF-like 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0042832 defense response to protozoan IMP
 biological_processGO:0043011 myeloid dendritic cell differentiation IMP
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001393 ataxia "inability to coordinate voluntary muscular movements" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:67231]
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Allelic Composition: a/a,Tyrc/Tyrem2Ove
Genetic Background: involves: C57BL/6 * FVB

 MP:0010750 increased susceptibility to parasitic infection induced morbidity/mortality "increased likelihood that an organism will display the expected moribund state caused by a parasitic invasion or from components of or toxins produced by parasites" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
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Allelic Composition: PhexHpr/Phex+
Genetic Background: involves: C3H/HeH * C57BL/6J

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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