ENSMUSG00000039717


Mus musculus

Features
Gene ID: ENSMUSG00000039717
  
Biological name :Ralyl
  
Synonyms : Q8BTF8 / Ralyl / RNA-binding Raly-like protein
  
Possible biological names infered from orthology : Q86SE5 / RALY RNA binding protein like
  
Species: Mus musculus
  
Chr. number: 3
Strand: 1
Band: A1
Gene start: 13471655
Gene end: 14182287
  
Corresponding Affymetrix probe sets: 10490856 (MoGene1.0st)   1454715_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000142094
Ensembl peptide - ENSMUSP00000125848
Ensembl peptide - ENSMUSP00000148406
Ensembl peptide - ENSMUSP00000148795
Ensembl peptide - ENSMUSP00000148751
Ensembl peptide - ENSMUSP00000148430
Ensembl peptide - ENSMUSP00000104009
NCBI entrez gene - 76897     See in Manteia.
MGI - MGI:1924147
RefSeq - XM_017319803
RefSeq - NM_001163328
RefSeq - NM_001163329
RefSeq - NM_001163330
RefSeq - NM_178631
RefSeq - XM_006530100
RefSeq - XM_006530101
RefSeq - XM_006530102
RefSeq - XM_006530103
RefSeq - XM_011248150
RefSeq - XM_017319801
RefSeq - XM_017319802
RefSeq Peptide - NP_001156802
RefSeq Peptide - NP_001343962
RefSeq Peptide - NP_848746
RefSeq Peptide - NP_001156800
RefSeq Peptide - NP_001156801
swissprot - E9Q5X7
swissprot - Q8BTF8
swissprot - A0A1D5RMF0
swissprot - A0A1D5RLM5
swissprot - A0A1D5RLK6
swissprot - A0A0A6YXQ8
Ensembl - ENSMUSG00000039717
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ralylENSDARG00000090292Danio rerio
 RALYLENSGALG00000036938Gallus gallus
 RALYLENSG00000184672Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Raly / Q64012 / hnRNP-associated with lethal yellow / Q9UKM9* / RALY heterogeneous nuclear ribonucleoprotein*ENSMUSG0000002759356
Hnrnpc / Q9Z204 / Heteroous nuclear ribonucleoproteins C1/C2 / P07910* / heterogeneous nuclear ribonucleoprotein C (C1/C2)*ENSMUSG0000006037351


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR017347  Heterogeneous nuclear ribonucleoprotein C
 IPR034504  RALYL, RNA recognition motif
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0042802 identical protein binding ISO


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr