ENSMUSG00000040219


Mus musculus

Features
Gene ID: ENSMUSG00000040219
  
Biological name :Ttc12
  
Synonyms : Q8BW49 / tetratricopeptide repeat domain 12 / Ttc12
  
Possible biological names infered from orthology : Q9H892
  
Species: Mus musculus
  
Chr. number: 9
Strand: -1
Band: A5.3
Gene start: 49436963
Gene end: 49486225
  
Corresponding Affymetrix probe sets: 10593270 (MoGene1.0st)   1435211_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000056378
NCBI entrez gene - 235330     See in Manteia.
MGI - MGI:2444588
RefSeq - XM_011242511
RefSeq - NM_172770
RefSeq - XM_011242510
RefSeq Peptide - NP_766358
swissprot - Q8BW49
Ensembl - ENSMUSG00000040219
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ttc12ENSDARG00000056896Danio rerio
 TTC12ENSG00000149292Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Sgta / Q8BJU0 / small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha / O43765* / small glutamine rich tetratricopeptide repeat containing alpha*ENSMUSG000000049378
Sgtb / Q8VD33 / Small glutamine-rich tetratricopeptide repeat-containing protein beta / Q96EQ0* / small glutamine rich tetratricopeptide repeat containing beta*ENSMUSG000000427438
Stub1 / Q9WUD1 / STIP1 homology and U-Box containing protein 1 / Q9UNE7*ENSMUSG000000396155


Protein motifs (from Interpro)
Interpro ID Name
 IPR001440  Tetratricopeptide repeat 1
 IPR011989  Armadillo-like helical
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR013105  Tetratricopeptide repeat 2
 IPR016024  Armadillo-type fold
 IPR019734  Tetratricopeptide repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005813 centrosome ISO
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005488 binding IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr