ENSMUSG00000042743


Mus musculus

Features
Gene ID: ENSMUSG00000042743
  
Biological name :Sgtb
  
Synonyms : Q8VD33 / Sgtb / Small glutamine-rich tetratricopeptide repeat-containing protein beta
  
Possible biological names infered from orthology : Q96EQ0 / small glutamine rich tetratricopeptide repeat containing beta
  
Species: Mus musculus
  
Chr. number: 13
Strand: 1
Band: D1
Gene start: 104109741
Gene end: 104141735
  
Corresponding Affymetrix probe sets: 10406941 (MoGene1.0st)   1437977_at (Mouse Genome 430 2.0 Array)   1451529_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000124895
Ensembl peptide - ENSMUSP00000125569
Ensembl peptide - ENSMUSP00000041307
NCBI entrez gene - 218544     See in Manteia.
MGI - MGI:2444615
RefSeq - XM_006517610
RefSeq - XM_006517611
RefSeq - NM_144838
RefSeq Peptide - NP_659087
swissprot - Q8VD33
swissprot - E0CZ99
swissprot - E0CX61
Ensembl - ENSMUSG00000042743
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sgtbENSDARG00000016769Danio rerio
 SGTBENSGALG00000014768Gallus gallus
 SGTBENSG00000197860Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Sgta / Q8BJU0 / small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha / O43765* / small glutamine rich tetratricopeptide repeat containing alpha*ENSMUSG0000000493758
Ttc12 / Q8BW49 / tetratricopeptide repeat domain 12 / Q9H892*ENSMUSG0000004021917
Stub1 / Q9WUD1 / STIP1 homology and U-Box containing protein 1 / Q9UNE7*ENSMUSG0000003961511


Protein motifs (from Interpro)
Interpro ID Name
 IPR001440  Tetratricopeptide repeat 1
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR019734  Tetratricopeptide repeat
 IPR032374  SGTA, homodimerisation domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0042803 protein homodimerization activity ISO
 molecular_functionGO:0046982 protein heterodimerization activity ISO


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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