ENSMUSG00000040785


Mus musculus

Features
Gene ID: ENSMUSG00000040785
  
Biological name :Ttc3
  
Synonyms : tetratricopeptide repeat domain 3 / Ttc3
  
Possible biological names infered from orthology : P53804
  
Species: Mus musculus
  
Chr. number: 16
Strand: 1
Band: C4
Gene start: 94370618
Gene end: 94522117
  
Corresponding Affymetrix probe sets: 10437080 (MoGene1.0st)   1416482_at (Mouse Genome 430 2.0 Array)   1416483_at (Mouse Genome 430 2.0 Array)   1416484_at (Mouse Genome 430 2.0 Array)   1441684_at (Mouse Genome 430 2.0 Array)   1447908_x_at (Mouse Genome 430 2.0 Array)   1448361_at (Mouse Genome 430 2.0 Array)   1460077_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000117530
Ensembl peptide - ENSMUSP00000147708
Ensembl peptide - ENSMUSP00000123442
Ensembl peptide - ENSMUSP00000123037
Ensembl peptide - ENSMUSP00000122726
Ensembl peptide - ENSMUSP00000122724
Ensembl peptide - ENSMUSP00000122650
Ensembl peptide - ENSMUSP00000122439
Ensembl peptide - ENSMUSP00000122425
Ensembl peptide - ENSMUSP00000122006
Ensembl peptide - ENSMUSP00000121501
Ensembl peptide - ENSMUSP00000121349
Ensembl peptide - ENSMUSP00000119265
Ensembl peptide - ENSMUSP00000119035
Ensembl peptide - ENSMUSP00000118763
Ensembl peptide - ENSMUSP00000117881
Ensembl peptide - ENSMUSP00000112801
Ensembl peptide - ENSMUSP00000113311
Ensembl peptide - ENSMUSP00000114483
Ensembl peptide - ENSMUSP00000115389
Ensembl peptide - ENSMUSP00000116097
Ensembl peptide - ENSMUSP00000116896
Ensembl peptide - ENSMUSP00000117369
NCBI entrez gene - 22129     See in Manteia.
MGI - MGI:1276539
RefSeq - XM_006522987
RefSeq - XM_006522988
RefSeq - XM_006522989
RefSeq - XM_006522990
RefSeq - XM_006522991
RefSeq - XM_006522992
RefSeq - XM_006522993
RefSeq - XM_006522994
RefSeq - XM_006522995
RefSeq - XM_006522996
RefSeq - XM_006522997
RefSeq - XM_006522998
RefSeq - XM_006522999
RefSeq - XM_006523000
RefSeq - XM_011246113
RefSeq - XM_017316938
RefSeq - XM_017316939
RefSeq - XM_017316940
RefSeq - XM_017316941
RefSeq - XM_017316942
RefSeq - NM_009441
RefSeq - XM_006522985
RefSeq - XM_006522986
RefSeq - XM_006522984
RefSeq Peptide - NP_033467
swissprot - Q05BF2
swissprot - D6RHT6
swissprot - D6RFU5
swissprot - D6REF1
swissprot - D6RDD2
swissprot - D6RD03
swissprot - D3Z502
swissprot - D3Z485
swissprot - D3Z3E5
swissprot - D3Z330
swissprot - D3Z2K0
swissprot - D3YZA6
swissprot - D3YZ03
swissprot - A0A1B0GRX9
swissprot - A0A0R4J1T2
swissprot - F6XYB0
swissprot - F6ZS17
swissprot - F7DAQ7
swissprot - G5E8T2
swissprot - G5E8U3
swissprot - E9QAH3
Ensembl - ENSMUSG00000040785
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:ch211-139a5.1ENSDARG00000092018Danio rerio
 TTC3ENSGALG00000016050Gallus gallus
 TTC3ENSG00000182670Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Dzip3 / Q7TPV2 / E3 ubiquitin-protein ligase DZIP3 / Q86Y13* / DAZ interacting zinc finger protein 3*ENSMUSG0000006406111
Q8BFU3 / Rnf214 / RING finger protein 214 / Q8ND24*ENSMUSG000000427906


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR019734  Tetratricopeptide repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006511 ubiquitin-dependent protein catabolic process IEA
 biological_processGO:0070936 protein K48-linked ubiquitination IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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