ENSMUSG00000041477


Mus musculus

Features
Gene ID: ENSMUSG00000041477
  
Biological name :Dcp1b
  
Synonyms : Dcp1b / mRNA-decapping enzyme 1B / Q3U564
  
Possible biological names infered from orthology : decapping mRNA 1B / Q8IZD4
  
Species: Mus musculus
  
Chr. number: 6
Strand: 1
Band: F1
Gene start: 119175253
Gene end: 119221616
  
Corresponding Affymetrix probe sets: 10541131 (MoGene1.0st)   1437572_at (Mouse Genome 430 2.0 Array)   1444030_at (Mouse Genome 430 2.0 Array)   1458614_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000073568
Ensembl peptide - ENSMUSP00000108397
NCBI entrez gene - 319618     See in Manteia.
MGI - MGI:2442404
RefSeq - XM_017321622
RefSeq - NM_001033379
RefSeq - XM_006506238
RefSeq - XM_006506244
RefSeq Peptide - NP_001028551
swissprot - B9EIX0
swissprot - Q3U564
Ensembl - ENSMUSG00000041477
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 dcp1bENSDARG00000045484Danio rerio
 ENSGALG00000038402Gallus gallus
 DCP1BENSG00000151065Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Dcp1a / Q91YD3 / mRNA-decapping enzyme 1A / Q9NPI6* / decapping mRNA 1A*ENSMUSG0000002196227


Protein motifs (from Interpro)
Interpro ID Name
 IPR010334  mRNA-decapping enzyme subunit 1
 IPR011993  PH-like domain superfamily
 IPR031953  mRNA-decapping enzyme, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEA
 biological_processGO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IBA
 biological_processGO:0031087 deadenylation-independent decapping of nuclear-transcribed mRNA IBA
 biological_processGO:0043085 positive regulation of catalytic activity IEA
 cellular_componentGO:0000932 P-body IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol ISO
 cellular_componentGO:0043231 intracellular membrane-bounded organelle ISO
 molecular_functionGO:0003729 mRNA binding IBA
 molecular_functionGO:0008047 enzyme activator activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0030234 enzyme regulator activity IBA


Pathways (from Reactome)
Pathway description
mRNA decay by 5 to 3 exoribonuclease


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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