ENSMUSG00000043962


Mus musculus

Features
Gene ID: ENSMUSG00000043962
  
Biological name :Thrap3
  
Synonyms : Q569Z6 / Thrap3 / thyroid hormone receptor associated protein 3
  
Possible biological names infered from orthology : Q9Y2W1
  
Species: Mus musculus
  
Chr. number: 4
Strand: -1
Band: D2.2
Gene start: 126164082
Gene end: 126202760
  
Corresponding Affymetrix probe sets: 10516296 (MoGene1.0st)   1427408_a_at (Mouse Genome 430 2.0 Array)   1452125_at (Mouse Genome 430 2.0 Array)   1460545_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000120140
Ensembl peptide - ENSMUSP00000131956
Ensembl peptide - ENSMUSP00000129775
Ensembl peptide - ENSMUSP00000129416
Ensembl peptide - ENSMUSP00000126399
Ensembl peptide - ENSMUSP00000125856
Ensembl peptide - ENSMUSP00000120455
Ensembl peptide - ENSMUSP00000079722
Ensembl peptide - ENSMUSP00000101747
Ensembl peptide - ENSMUSP00000101748
Ensembl peptide - ENSMUSP00000118414
NCBI entrez gene - 230753     See in Manteia.
MGI - MGI:2442637
RefSeq - XM_011240503
RefSeq - NM_001356455
RefSeq - NM_001356456
RefSeq - NM_146153
RefSeq - XM_006503041
RefSeq Peptide - NP_001343385
RefSeq Peptide - NP_666265
RefSeq Peptide - NP_001343384
swissprot - E9Q5X3
swissprot - Q569Z6
swissprot - Q8BZN7
swissprot - E9Q6C5
swissprot - E9Q494
swissprot - A2AJI7
swissprot - A2AJI6
swissprot - F6YH92
swissprot - A2AJI3
swissprot - F6YSQ2
swissprot - F7AB07
Ensembl - ENSMUSG00000043962
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 thrap3aENSDARG00000101989Danio rerio
 thrap3bENSDARG00000098228Danio rerio
 THRAP3ENSGALG00000002144Gallus gallus
 Q9Y2W1ENSG00000054118Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Bclaf1 / Q8K019 / Bcl-2-associated transcription factor 1 / Q9NYF8*ENSMUSG0000003760840
A2AG58 / Bclaf3 / Bclaf1 and Thrap3 family member 3 / A2AJT9*ENSMUSG0000004415016


Protein motifs (from Interpro)
Interpro ID Name
 IPR018545  Btz domain
 IPR026667  Thyroid hormone receptor-associated protein 3
 IPR029199  THRAP3/BCLAF1 family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000381 regulation of alternative mRNA splicing, via spliceosome IEA
 biological_processGO:0000956 nuclear-transcribed mRNA catabolic process IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IC
 biological_processGO:0006367 transcription initiation from RNA polymerase II promoter IEA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0007623 circadian rhythm IEP
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0030518 intracellular steroid hormone receptor signaling pathway IEA
 biological_processGO:0030521 androgen receptor signaling pathway IEA
 biological_processGO:0042753 positive regulation of circadian rhythm IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0048026 positive regulation of mRNA splicing, via spliceosome IEA
 biological_processGO:0048255 mRNA stabilization IEA
 biological_processGO:0048511 rhythmic process IEA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0016592 mediator complex IEA
 cellular_componentGO:0016607 nuclear speck ISO
 cellular_componentGO:0035145 exon-exon junction complex IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0001046 core promoter sequence-specific DNA binding IDA
 molecular_functionGO:0003712 transcription coregulator activity IEA
 molecular_functionGO:0003713 transcription coactivator activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0046966 thyroid hormone receptor binding IEA
 molecular_functionGO:0051219 phosphoprotein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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