ENSMUSG00000046380


Mus musculus

Features
Gene ID: ENSMUSG00000046380
  
Biological name :Jrk
  
Synonyms : Jerky protein / Jrk / Q60976
  
Possible biological names infered from orthology : Jrk helix-turn-helix protein
  
Species: Mus musculus
  
Chr. number: 15
Strand: -1
Band: D3
Gene start: 74702301
Gene end: 74709535
  
Corresponding Affymetrix probe sets: 10429495 (MoGene1.0st)   1418409_at (Mouse Genome 430 2.0 Array)   1418410_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000051842
NCBI entrez gene - 16469     See in Manteia.
MGI - MGI:106214
RefSeq - NM_008415
RefSeq Peptide - NP_032441
swissprot - Q543Z9
swissprot - Q60976
Ensembl - ENSMUSG00000046380
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 JRKENSG00000234616Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Jrkl / B2RRL2 / Jerky protein homolog-like / Q9Y4A0* / JRK like*ENSMUSG0000007908330
Tigd2 / Q0VBL1 / Tigger transposable element-derived protein 2 / Q4W5G0* / tigger transposable element derived 2*ENSMUSG0000004923230
Tigd5 / Q499M4 / Tigger transposable element derived 5 / Q53EQ6*ENSMUSG0000010390623
Tigd4 / Q8BUZ3 / Tigger transposable element-derived protein 4 / Q8IY51* / tigger transposable element derived 4*ENSMUSG0000004781919
Cenpb / P27790 / Major centromere autoantigen B / P07199* / centromere protein B*ENSMUSG0000006826719
Tigd3 / Q7TM95 / Tigger transposable element-derived protein 3 / Q6B0B8* / tigger transposable element derived 3*ENSMUSG0000004439016


Protein motifs (from Interpro)
Interpro ID Name
 IPR004875  DDE superfamily endonuclease domain
 IPR006600  HTH CenpB-type DNA-binding domain
 IPR007889  DNA binding HTH domain, Psq-type
 IPR009057  Homeobox-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005737 cytoplasm IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003729 mRNA binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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