ENSMUSG00000103906


Mus musculus

Features
Gene ID: ENSMUSG00000103906
  
Biological name :Tigd5
  
Synonyms : Q499M4 / Tigd5 / Tigger transposable element derived 5
  
Possible biological names infered from orthology : Q53EQ6
  
Species: Mus musculus
  
Chr. number: 15
Strand: 1
Band: D3
Gene start: 75909735
Gene end: 75914535
  
Corresponding Affymetrix probe sets: 10424743 (MoGene1.0st)   1440377_at (Mouse Genome 430 2.0 Array)   1449646_s_at (Mouse Genome 430 2.0 Array)   1460743_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000141473
NCBI entrez gene - 105734     See in Manteia.
MGI - MGI:2145902
RefSeq - NM_178646
RefSeq Peptide - NP_848761
swissprot - Q499M4
Ensembl - ENSMUSG00000103906
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TIGD5ENSGALG00000036792Gallus gallus
 TIGD5ENSG00000179886Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Jrkl / B2RRL2 / Jerky protein homolog-like / Q9Y4A0* / JRK like*ENSMUSG0000007908323
Tigd2 / Q0VBL1 / Tigger transposable element-derived protein 2 / Q4W5G0* / tigger transposable element derived 2*ENSMUSG0000004923221
Jrk / Q60976 / Jerky protein / Jrk helix-turn-helix protein*ENSMUSG0000004638020
Cenpb / P27790 / Major centromere autoantigen B / P07199* / centromere protein B*ENSMUSG0000006826717
Tigd4 / Q8BUZ3 / Tigger transposable element-derived protein 4 / Q8IY51* / tigger transposable element derived 4*ENSMUSG0000004781915
Tigd3 / Q7TM95 / Tigger transposable element-derived protein 3 / Q6B0B8* / tigger transposable element derived 3*ENSMUSG0000004439015


Protein motifs (from Interpro)
Interpro ID Name
 IPR004875  DDE superfamily endonuclease domain
 IPR006600  HTH CenpB-type DNA-binding domain
 IPR007889  DNA binding HTH domain, Psq-type
 IPR009057  Homeobox-like domain superfamily
 IPR036388  Winged helix-like DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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