ENSMUSG00000048012


Mus musculus

Features
Gene ID: ENSMUSG00000048012
  
Biological name :Zfp473
  
Synonyms : Q8BI67 / Zfp473 / zinc finger protein 473
  
Possible biological names infered from orthology : Q8WTR7 / ZNF473
  
Species: Mus musculus
  
Chr. number: 7
Strand: -1
Band: B3
Gene start: 44731480
Gene end: 44751050
  
Corresponding Affymetrix probe sets: 10562897 (MoGene1.0st)   1457078_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000127101
Ensembl peptide - ENSMUSP00000113789
Ensembl peptide - ENSMUSP00000127738
Ensembl peptide - ENSMUSP00000130689
Ensembl peptide - ENSMUSP00000051069
Ensembl peptide - ENSMUSP00000113316
Ensembl peptide - ENSMUSP00000113774
NCBI entrez gene - 243963     See in Manteia.
MGI - MGI:2442697
RefSeq - XM_011250862
RefSeq - NM_001289836
RefSeq - NM_001289837
RefSeq - NM_001289838
RefSeq - NM_001289839
RefSeq - NM_178734
RefSeq - XM_006540878
RefSeq - XM_006540879
RefSeq - XM_006540881
RefSeq - XM_006540882
RefSeq Peptide - NP_001276767
RefSeq Peptide - NP_001276768
RefSeq Peptide - NP_848849
RefSeq Peptide - NP_001276765
RefSeq Peptide - NP_001276766
swissprot - Q4VA40
swissprot - E9QAY2
swissprot - E9Q4I9
swissprot - Q8BI67
swissprot - E9Q0R5
Ensembl - ENSMUSG00000048012
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q8WTR7ENSG00000142528Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001909  Krueppel-associated box
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR036051  KRAB domain superfamily
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006398 mRNA 3"-end processing by stem-loop binding and cleavage ISO
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm ISO
 cellular_componentGO:0015030 Cajal body ISS
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Cleavage of Growing Transcript in the Termination Region
SLBP independent Processing of Histone Pre-mRNAs
Generic Transcription Pathway
SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000028330 Ncbp1 / Q3UYV9 / Nuclear cap-binding protein subunit 1 / Q09161*  / complex / reaction
 ENSMUSG00000022774 Ncbp2 / Q9CQ49 / Nuclear cap-binding protein subunit 2 / P52298*  / complex / reaction
 ENSMUSG00000004642 Slbp / P97440 / stem-loop binding protein / Q14493*  / reaction / complex






 

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contact: otassy@igbmc.fr