ENSMUSG00000051678


Mus musculus

Features
Gene ID: ENSMUSG00000051678
  
Biological name :Pcdhb6
  
Synonyms : Pcdhb6 / Protocadherin beta-6 / Q91XZ4
  
Possible biological names infered from orthology : PCDHB5 / protocadherin beta 5 / Q9Y5E4
  
Species: Mus musculus
  
Chr. number: 18
Strand: 1
Band: B3
Gene start: 37333921
Gene end: 37337674
  
Corresponding Affymetrix probe sets: 10455069 (MoGene1.0st)   1423014_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000141773
Ensembl peptide - ENSMUSP00000058592
NCBI entrez gene - 93877     See in Manteia.
MGI - MGI:2136740
RefSeq - NM_053131
RefSeq Peptide - NP_444361
swissprot - A0A0A6YX01
swissprot - Q91XZ4
Ensembl - ENSMUSG00000051678
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000038668Gallus gallus
 ENSGALG00000045780Gallus gallus
 PCDHB5ENSG00000113209Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Pcdhb8 / Q91XZ2 / Protocadherin beta-8 / Q9Y5E4* / PCDHB5* / protocadherin beta 5*ENSMUSG0000004587689
Pcdhb4 / PCDHB5* / Q9Y5E4* / protocadherin beta 5*ENSMUSG0000004568985
Pcdhb10 / PCDHB5* / Q9Y5E4* / protocadherin beta 5*ENSMUSG0000004565785
Pcdhb12 / protocadherin beta 12 / PCDHB5* / Q9Y5E4* / protocadherin beta 5*ENSMUSG0000004345883
Pcdhb11 / PCDHB5* / Q9Y5E4* / protocadherin beta 5*ENSMUSG0000005148683
Q6PB90 / Pcdhb14 / Protocadherin beta-14 ENSMUSG0000004404375
Pcdhb5 / PCDHB4* / Q9Y5E5* / protocadherin beta 4*ENSMUSG0000006368773
Pcdhb9 / protocadherin beta 9 / PCDHB4* / Q9Y5E5* / protocadherin beta 4*ENSMUSG0000005124272
Pcdhb13 / protocadherin beta 13 / PCDHB6* / Q9Y5E3* / protocadherin beta 6*ENSMUSG0000004730772
Pcdhb3 / protocadherin beta 3 / Q9Y5E6*ENSMUSG0000004549871
Pcdhb7 / PCDHB4* / Q9Y5E5* / protocadherin beta 4*ENSMUSG0000004506271
Pcdhb22 / PCDHB5* / Q9Y5E4* / protocadherin beta 5*ENSMUSG0000007359170
Pcdhb15 / protocadherin beta 15 / PCDHB7* / Q9Y5E2* / protocadherin beta 7*ENSMUSG0000004703369
Pcdhb2 / protocadherin beta 2 / Q9Y5E7*ENSMUSG0000005159969
Pcdhb17 / PCDHB5* / Q9Y5E4* / protocadherin beta 5*ENSMUSG0000004638769
Pcdhb19 / protocadherin beta 19 / PCDHB5* / Q9Y5E4* / protocadherin beta 5*ENSMUSG0000004331369
Q91Y02 / Pcdhb18 / Protocadherin beta-18 / PCDHB9* / Q9UN67* / Q9Y5E1* / PCDHB10* / protocadherin beta 9* / protocadherin beta 10*ENSMUSG0000004834769
Pcdhb16 / Q9Y5F0* / PCDHB8* / Q9UN66* / PCDHB13* / protocadherin beta 8* / protocadherin beta 13*ENSMUSG0000004791069
Pcdhb21 / protocadherin beta 21ENSMUSG0000004402268
Pcdhb20 / protocadherin beta 20 / Q9Y5E9* / PCDHB14* / protocadherin beta 14*ENSMUSG0000004619168


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR013164  Cadherin, N-terminal
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR032455  Cadherin, cytoplasmic C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IDA
 biological_processGO:0007268 chemical synaptic transmission IBA
 biological_processGO:0007416 synapse assembly IBA
 biological_processGO:0009988 cell-cell recognition IDA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IDA
 molecular_functionGO:0042802 identical protein binding IDA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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