ENSGALG00000038668


Gallus gallus

Features
Gene ID: ENSGALG00000038668
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : PCDHB1 / PCDHB10 / PCDHB11 / PCDHB12 / PCDHB13 / PCDHB14 / Pcdhb15 / PCDHB16 / Pcdhb17 / Pcdhb18 / Pcdhb19 / PCDHB2 / Pcdhb20 / Pcdhb21 / Pcdhb22 / PCDHB3 / PCDHB4 / PCDHB5 / PCDHB6 / PCDHB7 / PCDHB8 / PCDHB9 / protocadherin beta 1 / protocadherin beta 10 / protocadherin beta 11 / protocadherin beta 12 / protocadherin beta 13 / protocadherin beta 14 / protocadherin beta 15 / protocadherin beta 16 / Protocadherin beta-18 / protocadherin beta 19 / protocadherin beta 2 / protocadherin beta 20 / protocadherin beta 21 / protocadherin beta 3 / protocadherin beta 4 / protocadherin beta 5 / protocadherin beta 6 / protocadherin beta 7 / protocadherin beta 8 / protocadherin beta 9 / Q6PB90 / Q91XZ2 / Q91XZ4 / Q91Y02 / Q9NRJ7 / Q9UN66 / Q9UN67 / Q9Y5E1 / Q9Y5E2 / Q9Y5E3 / Q9Y5E4 / Q9Y5E5 / Q9Y5E6 / Q9Y5E7 / Q9Y5E9 / Q9Y5F0 / Q9Y5F1 / Q9Y5F2 / Q9Y5F3
  
Species: Gallus gallus
  
Chr. number: 13
Strand: 1
Band:
Gene start: 1689382
Gene end: 1691037
  
Corresponding Affymetrix probe sets: GgaAffx.7600.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000057242
NCBI entrez gene - 107054479     See in Manteia.
RefSeq - XM_015293557
swissprot - A0A1D5PWB1
Ensembl - ENSGALG00000038668
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PCDHB1ENSG00000171815Homo sapiens
 PCDHB2ENSG00000112852Homo sapiens
 PCDHB3ENSG00000113205Homo sapiens
 PCDHB4ENSG00000081818Homo sapiens
 PCDHB5ENSG00000113209Homo sapiens
 PCDHB6ENSG00000113211Homo sapiens
 PCDHB7ENSG00000113212Homo sapiens
 PCDHB8ENSG00000120322Homo sapiens
 PCDHB9ENSG00000177839Homo sapiens
 Q9NRJ7ENSG00000272674Homo sapiens
 Q9UN67ENSG00000120324Homo sapiens
 Q9Y5E9ENSG00000120327Homo sapiens
 Q9Y5F0ENSG00000187372Homo sapiens
 Q9Y5F1ENSG00000120328Homo sapiens
 Q9Y5F2ENSG00000197479Homo sapiens
 Pcdhb1ENSMUSG00000051663Mus musculus
 Pcdhb10ENSMUSG00000045657Mus musculus
 Pcdhb11ENSMUSG00000051486Mus musculus
 Pcdhb12ENSMUSG00000043458Mus musculus
 Pcdhb13ENSMUSG00000047307Mus musculus
 Pcdhb15ENSMUSG00000047033Mus musculus
 Pcdhb16ENSMUSG00000047910Mus musculus
 Pcdhb17ENSMUSG00000046387Mus musculus
 Pcdhb19ENSMUSG00000043313Mus musculus
 Pcdhb2ENSMUSG00000051599Mus musculus
 Pcdhb20ENSMUSG00000046191Mus musculus
 Pcdhb21ENSMUSG00000044022Mus musculus
 Pcdhb22ENSMUSG00000073591Mus musculus
 Pcdhb3ENSMUSG00000045498Mus musculus
 Pcdhb4ENSMUSG00000045689Mus musculus
 Pcdhb5ENSMUSG00000063687Mus musculus
 Pcdhb6ENSMUSG00000051678Mus musculus
 Pcdhb7ENSMUSG00000045062Mus musculus
 Pcdhb8ENSMUSG00000045876Mus musculus
 Pcdhb9ENSMUSG00000051242Mus musculus
 Q6PB90ENSMUSG00000044043Mus musculus
 Q91Y02ENSMUSG00000048347Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9Y5E5* / Q9Y5E4* / Q9Y5E3* / Q9Y5E2* / Q9Y5E1* / Q9UN67* / Q9UN66* / Q9NRJ7* / Q91Y02* / Q91XZ4* / Q91XZ2* / Q6PB90* / PCDHB1* / PCDHB2* / PCDHB3* / PCDHB4* / PCDHB5* / PCDHB6* / PCDHB7* /...ENSGALG0000004578049
Q9Y5G3* / Q9UN71* / Q9Y5F8* / Q9Y5F9* / Q9Y5G0* / Q9Y5G1* / Q9Y5G2* / Pcdhgb8* / PCDHGB1* / PCDHGB2* / PCDHGB3* / PCDHGB4* / PCDHGB5* / PCDHGB6* / PCDHGB7* / protocadherin gamma subfamily B...ENSGALG0000003802929


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR032455  Cadherin, cytoplasmic C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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