ENSG00000120322


Homo sapiens

Features
Gene ID: ENSG00000120322
  
Biological name :PCDHB8
  
Synonyms : PCDHB8 / protocadherin beta 8 / Q9UN66
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: 1
Band: q31.3
Gene start: 141177790
Gene end: 141180529
  
Corresponding Affymetrix probe sets: 221319_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000239444
NCBI entrez gene - 56128     See in Manteia.
OMIM - 606334
RefSeq - NM_019120
RefSeq Peptide - NP_061993
swissprot - Q9UN66
Ensembl - ENSG00000120322
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000038668Gallus gallus
 ENSGALG00000045780Gallus gallus
 Pcdhb16ENSMUSG00000047910Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9Y5F0 / PCDHB13 / protocadherin beta 13ENSG0000018737292
Q9NRJ7 / PCDHB16 / protocadherin beta 16ENSG0000027267477
PCDHB3 / Q9Y5E6 / protocadherin beta 3ENSG0000011320575
PCDHB2 / Q9Y5E7 / protocadherin beta 2ENSG0000011285274
Q9Y5F2 / PCDHB11 / protocadherin beta 11ENSG0000019747974
PCDHB5 / Q9Y5E4 / protocadherin beta 5ENSG0000011320974
Q9Y5E9 / PCDHB14 / protocadherin beta 14ENSG0000012032773
Q9Y5F1 / PCDHB12 / protocadherin beta 12ENSG0000012032873
Q9UN67 / PCDHB10 / protocadherin beta 10ENSG0000012032473
PCDHB4 / Q9Y5E5 / protocadherin beta 4ENSG0000008181873
PCDHB6 / Q9Y5E3 / protocadherin beta 6ENSG0000011321173
PCDHB9 / Q9Y5E1 / protocadherin beta 9ENSG0000017783972
PCDHB7 / Q9Y5E2 / protocadherin beta 7ENSG0000011321272
PCDHB1 / Q9Y5F3 / protocadherin beta 1ENSG0000017181550
Q9Y5G0 / PCDHGB5 / protocadherin gamma subfamily B, 5ENSG0000027654746
Q9Y5G2 / PCDHGB2 / protocadherin gamma subfamily B, 2ENSG0000025391045
Q9Y5F9 / PCDHGB6 / protocadherin gamma subfamily B, 6ENSG0000025330545
Q9UN71 / PCDHGB4 / protocadherin gamma subfamily B, 4ENSG0000025395345
Q9Y5H4 / PCDHGA1 / protocadherin gamma subfamily A, 1ENSG0000020495644
Q9Y5F8 / PCDHGB7 / protocadherin gamma subfamily B, 7ENSG0000025412244


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR013164  Cadherin, N-terminal
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR032455  Cadherin, cytoplasmic C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IBA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0007268 chemical synaptic transmission IBA
 biological_processGO:0007416 synapse assembly IBA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding ISS
 molecular_functionGO:0042802 identical protein binding ISS
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr