ENSG00000120328


Homo sapiens

Features
Gene ID: ENSG00000120328
  
Biological name :PCDHB12
  
Synonyms : PCDHB12 / protocadherin beta 12 / Q9Y5F1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: 1
Band: q31.3
Gene start: 141208697
Gene end: 141212571
  
Corresponding Affymetrix probe sets: 221408_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000239450
Ensembl peptide - ENSP00000485352
Ensembl peptide - ENSP00000485303
NCBI entrez gene - 56124     See in Manteia.
OMIM - 606338
RefSeq - NM_018932
RefSeq Peptide - NP_061755
swissprot - A0A096LP27
swissprot - Q9Y5F1
Ensembl - ENSG00000120328
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000038668Gallus gallus
 ENSGALG00000045780Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9Y5F2 / PCDHB11 / protocadherin beta 11ENSG0000019747989
Q9Y5E9 / PCDHB14 / protocadherin beta 14ENSG0000012032776
PCDHB7 / Q9Y5E2 / protocadherin beta 7ENSG0000011321275
PCDHB3 / Q9Y5E6 / protocadherin beta 3ENSG0000011320575
PCDHB4 / Q9Y5E5 / protocadherin beta 4ENSG0000008181874
Q9Y5F0 / PCDHB13 / protocadherin beta 13ENSG0000018737274
PCDHB2 / Q9Y5E7 / protocadherin beta 2ENSG0000011285274
PCDHB5 / Q9Y5E4 / protocadherin beta 5ENSG0000011320974
Q9NRJ7 / PCDHB16 / protocadherin beta 16ENSG0000027267474
PCDHB9 / Q9Y5E1 / protocadherin beta 9ENSG0000017783973
PCDHB8 / Q9UN66 / protocadherin beta 8ENSG0000012032273
PCDHB6 / Q9Y5E3 / protocadherin beta 6ENSG0000011321172
Q9UN67 / PCDHB10 / protocadherin beta 10ENSG0000012032472
PCDHB1 / Q9Y5F3 / protocadherin beta 1ENSG0000017181551
Q9Y5G0 / PCDHGB5 / protocadherin gamma subfamily B, 5ENSG0000027654745
Q9Y5G4 / PCDHGA9 / protocadherin gamma subfamily A, 9ENSG0000026193445
Q9Y5F9 / PCDHGB6 / protocadherin gamma subfamily B, 6ENSG0000025330545
Q9Y5G3 / PCDHGB1 / protocadherin gamma subfamily B, 1ENSG0000025422144
Q9Y5G2 / PCDHGB2 / protocadherin gamma subfamily B, 2ENSG0000025391044
Q9Y5H4 / PCDHGA1 / protocadherin gamma subfamily A, 1ENSG0000020495644


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR013164  Cadherin, N-terminal
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR032455  Cadherin, cytoplasmic C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion TAS
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0007268 chemical synaptic transmission IBA
 biological_processGO:0007399 nervous system development TAS
 biological_processGO:0007416 synapse assembly IBA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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