ENSMUSG00000052533


Mus musculus

Features
Gene ID: ENSMUSG00000052533
  
Biological name :Nup188
  
Synonyms : Nucleoporin NUP188 homolog / Nup188 / Q6ZQH8
  
Possible biological names infered from orthology : nucleoporin 188 / Q5SRE5
  
Species: Mus musculus
  
Chr. number: 2
Strand: 1
Band: B
Gene start: 30286397
Gene end: 30344266
  
Corresponding Affymetrix probe sets: 10470973 (MoGene1.0st)   1427047_at (Mouse Genome 430 2.0 Array)   1442314_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000065836
Ensembl peptide - ENSMUSP00000109264
Ensembl peptide - ENSMUSP00000121742
Ensembl peptide - ENSMUSP00000122398
NCBI entrez gene - 227699     See in Manteia.
MGI - MGI:2446190
RefSeq - XM_006497934
RefSeq - NM_198304
RefSeq Peptide - NP_938046
swissprot - F2Z4A7
swissprot - A2AWI5
swissprot - Q6ZQH8
swissprot - J3JSA4
Ensembl - ENSMUSG00000052533
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nup188ENSDARG00000030022Danio rerio
 NUP188ENSGALG00000043394Gallus gallus
 NUP188ENSG00000095319Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Gm28038ENSMUSG000000987945


Protein motifs (from Interpro)
Interpro ID Name
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold
 IPR018864  Nucleoporin Nup188


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006405 RNA export from nucleus IBA
 biological_processGO:0006606 protein import into nucleus IBA
 biological_processGO:0006913 nucleocytoplasmic transport IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0051028 mRNA transport IEA
 biological_processGO:0090521 glomerular visceral epithelial cell migration IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005643 nuclear pore IEA
 cellular_componentGO:0044611 nuclear pore inner ring IBA
 molecular_functionGO:0005488 binding IEA
 molecular_functionGO:0017056 structural constituent of nuclear pore IEA


Pathways (from Reactome)
Pathway description
Transport of Mature mRNA derived from an Intron-Containing Transcript
Regulation of Glucokinase by Glucokinase Regulatory Protein
snRNP Assembly
SUMOylation of DNA damage response and repair proteins
SUMOylation of ubiquitinylation proteins
Nuclear Pore Complex (NPC) Disassembly
Regulation of HSF1-mediated heat shock response
SUMOylation of SUMOylation proteins
SUMOylation of chromatin organization proteins
SUMOylation of RNA binding proteins
SUMOylation of DNA replication proteins
Transcriptional regulation by small RNAs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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