Manteia

ENSMUSG00000052798

Mus musculus

Features

Gene ID:	ENSMUSG00000052798

Biological name :	Nup107

Synonyms :	Nuclear pore complex protein Nup107 / Nup107 / Q8BH74

Possible biological names infered from orthology :	nucleoporin 107 / P57740

Species:	Mus musculus

Chr. number:	10
Strand:	-1
Band:	D2
Gene start:	117750621
Gene end:	117792705

Corresponding Affymetrix probe sets:	10372687 (MoGene1.0st) 1426751_s_at (Mouse Genome 430 2.0 Array)

Cross references:	Ensembl peptide - ENSMUSP00000063590 Ensembl peptide - ENSMUSP00000151757 Ensembl peptide - ENSMUSP00000129546 NCBI entrez gene - 103468 See in Manteia. MGI - MGI:2143854 RefSeq - NM_134010 RefSeq - XM_006513018 RefSeq Peptide - NP_598771 swissprot - E9Q4V9 swissprot - Q8BH74 swissprot - A0A1W2P7R1 Ensembl - ENSMUSG00000052798

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Paralog prediction (from Ensembl)

Paralog name

Similarity(%)

No match

Protein motifs (from Interpro)

Interpro ID	Name
IPR007252	Nuclear pore protein 84/107

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0000973	posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery	IBA
biological_process	GO:0006355	regulation of transcription, DNA-templated	IBA
biological_process	GO:0006406	mRNA export from nucleus	IEA
biological_process	GO:0006606	protein import into nucleus	IBA
biological_process	GO:0006913	nucleocytoplasmic transport	IEA
biological_process	GO:0008585	female gonad development	IEA
biological_process	GO:0015031	protein transport	IEA
biological_process	GO:0051028	mRNA transport	IEA
biological_process	GO:0051292	nuclear pore complex assembly	IEA
cellular_component	GO:0000775	chromosome, centromeric region	IEA
cellular_component	GO:0000776	kinetochore	ISO
cellular_component	GO:0000777	condensed chromosome kinetochore	IEA
cellular_component	GO:0005634	nucleus	IEA
cellular_component	GO:0005643	nuclear pore	IEA
cellular_component	GO:0005694	chromosome	IEA
cellular_component	GO:0016020	membrane	IEA
cellular_component	GO:0031080	nuclear pore outer ring	IEA
cellular_component	GO:0031965	nuclear membrane	ISS
cellular_component	GO:0034399	nuclear periphery	IEA
molecular_function	GO:0017056	structural constituent of nuclear pore	IEA

Pathways (from Reactome)

Pathway description

Phenotype (from MGI, Zfin or HPO)

ID	Phenotype	Definition	Genetic BG
MP:0001923	reduced female fertility	"reduced ability of female to produce live offspring" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:60409]	Show Allelic Composition: Trim25^tm1Mura/Trim25⁺,Usp15^L749R/Usp15⁺ Genetic Background: involves: 129S1/SvImJ * 129S4/SvJae * C57BL/6J

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr